Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL021997.1-201ENST00000605757 193 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AP000648.2-201ENST00000624182 404 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 PCMTD1P7-201ENST00000634506 357 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC127502.3-201ENST00000636170 1206 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC109315.1-201ENST00000584143 1347 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC087190.4-201ENST00000574616 8334 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MUC2-202ENST00000613187 4845 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL450345.1-202ENST00000605741 3881 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 IGKV7-3-201ENST00000357453 298 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MIR217-201ENST00000384817 110 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 RNA5SP345-201ENST00000410646 108 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 TPT1P2-201ENST00000413105 503 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC114755.2-201ENST00000413520 361 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 OR51A3P-201ENST00000413596 924 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC007738.1-201ENST00000413892 348 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 CENPIP1-201ENST00000425713 902 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL360081.1-201ENST00000428299 555 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 USP9YP9-201ENST00000429406 715 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 C8orf59P1-201ENST00000429930 303 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 SEPT7P5-201ENST00000434048 306 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC008072.1-201ENST00000434254 824 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC093155.1-201ENST00000440164 826 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC000111.2-201ENST00000448200 210 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC046144.1-201ENST00000478559 1853 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL035404.1-201ENST00000497982 568 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC011352.1-201ENST00000512300 793 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 RNU2-30P-201ENST00000516209 141 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 RNA5SP392-201ENST00000516905 112 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 IGKV1-32-201ENST00000519290 311 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 RPL23AP53-201ENST00000521854 457 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AP002963.1-201ENST00000530590 184 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL031320.1-201ENST00000604177 357 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AP003973.1-201ENST00000604639 691 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AL391358.1-201ENST00000605342 190 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC010424.2-201ENST00000607594 443 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC092354.2-201ENST00000607786 514 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MIR7973-1-201ENST00000614683 76 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC008083.4-201ENST00000615076 444 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC012414.7-202ENST00000622705 1090 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
DKK3Q9UBP4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AL672167.1-206ENST00000356293 943 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AL357515.1-201ENST00000402967 542 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 TBCAP2-201ENST00000416175 326 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC114814.2-201ENST00000419195 485 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 Z93242.1-201ENST00000427102 353 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 MTCO3P21-201ENST00000430791 643 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 MTCYBP39-201ENST00000437562 491 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms