Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL513185.3-201ENST00000433335 1300 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC000374.1-201ENST00000434698 1745 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 RNA5SP515-201ENST00000364570 118 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 RNU6-178P-201ENST00000384631 104 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 MTCO3P31-201ENST00000405526 789 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL356967.1-201ENST00000406305 431 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 CTSL3P-202ENST00000412179 788 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL136133.1-201ENST00000413694 376 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC008280.1-201ENST00000418851 412 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 RPS26P47-201ENST00000427219 348 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 IFNNP1-201ENST00000429219 553 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC005345.1-201ENST00000431868 217 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC011998.1-201ENST00000433403 117 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC010881.1-201ENST00000433830 235 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 UBE2V1P3-201ENST00000439651 417 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL606662.1-201ENST00000445763 553 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 NUTF2P3-201ENST00000448540 384 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 RPS4XP12-201ENST00000461747 709 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 BZW1P2-201ENST00000473537 826 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC135279.1-201ENST00000543493 504 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC138915.2-201ENST00000569776 97 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC110743.1-201ENST00000584870 478 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC103881.1-201ENST00000603476 538 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC103792.1-201ENST00000603591 919 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC079587.1-201ENST00000603846 277 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC010857.1-201ENST00000606398 594 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC064807.4-201ENST00000607201 407 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC122133.1-201ENST00000613964 233 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 AC068724.3-201ENST00000625906 87 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
COL20A1Q9P218 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL20A1Q9P218 NXPH1-205ENST00000602349 1953 ntBASIC5.04□□□□□ -1.6
COL20A1Q9P218 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL731566.1-201ENST00000620490 1937 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL20A1Q9P218 MAPK10-304ENST00000641341 3984 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 Y_RNA.25-201ENST00000362528 102 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 RNA5SP366-201ENST00000365454 123 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL20A1Q9P218 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 MIR3065-201ENST00000390137 79 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 RPL23AP26-201ENST00000412728 464 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 LUZP4P1-201ENST00000415420 344 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC092634.6-201ENST00000418558 192 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL022400.1-201ENST00000423946 935 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 IPMKP1-201ENST00000425988 855 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL353597.2-202ENST00000434901 373 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 MTND2P19-201ENST00000449129 1012 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC082651.2-201ENST00000496833 166 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC111000.2-201ENST00000507775 550 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 XKRY-201ENST00000510392 1100 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms