Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VAPAQ9P0L0 SPRR2C-201ENST00000290702 219 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 SNORA62-201ENST00000365493 153 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 DHFRP5-201ENST00000406944 564 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 U3.39-201ENST00000408569 239 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 FAR2P4-202ENST00000425399 584 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 OR4F13P-201ENST00000428478 931 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 TPT1P13-201ENST00000449760 499 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 GTF2H2B-203ENST00000508065 1432 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AC093770.1-201ENST00000511559 571 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 AC008121.2-201ENST00000614647 523 ntBASIC3.4□□□□□ -1.87
VAPAQ9P0L0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
VAPAQ9P0L0 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 HMGB3P18-201ENST00000406327 590 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC245054.1-201ENST00000420944 258 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 OR4C10P-201ENST00000434991 931 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 RPL21P89-201ENST00000444021 467 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC114755.5-201ENST00000447760 831 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 PPIAP3-201ENST00000450588 505 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC096992.1-201ENST00000459808 709 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 RPL23AP14-201ENST00000468281 468 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 RN7SKP122-201ENST00000515923 296 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AP000926.4-201ENST00000527351 454 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC026333.2-201ENST00000542164 106 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AL389895.1-201ENST00000554127 252 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 AC022387.2-201ENST00000604050 448 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ZNF33CP-201ENST00000432492 2030 ntBASIC3.39□□□□□ -1.87
VAPAQ9P0L0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VAPAQ9P0L0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 AC058791.1-201ENST00000608412 3198 ntBASIC3.38□□□□□ -1.87
VAPAQ9P0L0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VAPAQ9P0L0 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
VAPAQ9P0L0 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
VAPAQ9P0L0 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
VAPAQ9P0L0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms