Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 EIF2S2P2-201ENST00000447161 982 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 USP9YP32-201ENST00000452432 430 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC092155.2-201ENST00000454675 477 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RPL7P32-201ENST00000457119 744 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AL139824.2-201ENST00000458731 1095 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RPL6P9-201ENST00000466502 859 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC109327.1-201ENST00000471666 403 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC004453.1-201ENST00000487895 408 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC023050.1-201ENST00000498198 304 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC008565.1-201ENST00000509046 885 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 SNORA70.14-201ENST00000516205 110 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RNU6-347P-201ENST00000516658 105 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CDH12P4-201ENST00000517835 295 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CDH12P3-201ENST00000517935 295 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CDH12P1-201ENST00000518435 295 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 HMGB1P1-201ENST00000522557 636 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC104417.1-201ENST00000523974 751 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC027104.1-201ENST00000563702 681 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CYP2C60P-201ENST00000566088 139 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC125494.3-201ENST00000602759 455 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC090510.2-201ENST00000617465 629 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC009159.2-201ENST00000617603 606 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AL445363.3-201ENST00000623080 671 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC024595.1-201ENST00000623088 387 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC124312.6-202ENST00000623624 418 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC015726.3-201ENST00000624501 418 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 OR56B2P-202ENST00000641377 2453 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RNF6P1-201ENST00000444889 1784 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC106871.1-201ENST00000568324 3102 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC090229.1-201ENST00000590983 1609 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 PRO1804-201ENST00000623780 2050 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RNU6-353P-201ENST00000364266 108 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RNA5SP36-201ENST00000410197 133 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RNU4-22P-201ENST00000411058 166 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AL139128.1-201ENST00000413921 941 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 CHIAP3-201ENST00000423668 1133 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AL359265.2-201ENST00000434367 631 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 PTGES3P1-201ENST00000439531 483 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 ELOCP13-201ENST00000443934 329 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC068135.1-201ENST00000446164 246 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 DNAJC19P8-201ENST00000452887 259 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC010326.1-201ENST00000462726 602 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RPL7P1-201ENST00000468161 747 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RPL7P9-201ENST00000468715 747 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 RPL21P126-201ENST00000470049 478 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC087385.1-201ENST00000475062 312 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 MTND6P6-201ENST00000478031 263 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 METTL15P1-201ENST00000481421 1045 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC114322.1-201ENST00000506771 926 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC105233.3-201ENST00000531125 744 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AP002812.4-201ENST00000532139 286 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 OR8K4P-201ENST00000534608 872 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC095057.3-201ENST00000567102 1157 ntBASIC3.87□□□□□ -1.79
NDE1Q9NXR1 AC012409.3-201ENST00000611343 981 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms