Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC116563.2-201ENST00000624751 535 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC135068.12-201ENST00000637370 931 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 PCAT14-202ENST00000627127 3935 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL672167.1-205ENST00000641112 3080 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL031985.3-201ENST00000565390 2449 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 SNRPEP3-201ENST00000338402 276 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 SNORA67-201ENST00000384423 137 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 MIR1182-201ENST00000408363 97 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 RPS27AP7-201ENST00000422792 455 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC104651.1-201ENST00000427559 735 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 VDAC1P6-201ENST00000430062 855 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 RPL37P1-201ENST00000432310 284 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 OR52B5P-201ENST00000435337 951 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 RPL23AP15-201ENST00000450202 459 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC020890.1-201ENST00000491837 504 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 GTF2F2P1-201ENST00000511083 675 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-347P-201ENST00000516658 105 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 ARL2BPP5-201ENST00000523141 481 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 MTCYBP41-201ENST00000528913 1123 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 OR11J2P-201ENST00000555298 907 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 CYCSP40-201ENST00000575927 294 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC005771.1-201ENST00000585581 349 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC083760.1-201ENST00000589621 670 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 OR52B5P-202ENST00000641118 1110 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AC026951.1-201ENST00000559530 2459 ntBASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
AMBRA1Q9C0C7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-348P-201ENST00000384386 107 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MTCYBP36-201ENST00000404146 440 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RN7SKP56-201ENST00000410513 331 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RAB28P1-201ENST00000411517 641 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RPL17P12-201ENST00000413391 526 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RPL21P32-201ENST00000419877 477 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC010881.1-201ENST00000433830 235 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 FHP1-201ENST00000442741 703 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC239367.2-201ENST00000447309 705 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 HMGN3P1-201ENST00000453847 193 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 HIGD1AP8-201ENST00000453927 274 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RPS15AP1-201ENST00000457423 391 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 CYCSP34-201ENST00000458172 304 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC006463.2-201ENST00000473326 348 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 OR4G11P-201ENST00000492842 939 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RPS4XP20-201ENST00000505751 772 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms