Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 MIMT1-201ENST00000597105 1050 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC068647.1-201ENST00000489539 2265 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 OR52E6-202ENST00000379946 954 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 Z98941.1-201ENST00000407764 100 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 RPS7P15-201ENST00000415804 584 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 RPL7P53-201ENST00000421245 739 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 CYCSP35-201ENST00000451978 304 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 UBE2CP3-201ENST00000502715 450 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 PCBP2P3-201ENST00000509726 843 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 MIR3124-201ENST00000582636 67 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 AL031985.2-201ENST00000600955 480 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
UPF3BQ9BZI7 U3.39-201ENST00000408569 239 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC096664.2-201ENST00000411843 406 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 HSPD1P21-201ENST00000436541 245 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 RAB28P3-201ENST00000448325 597 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 RNU6-579P-201ENST00000516879 102 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC068714.1-201ENST00000559623 800 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AL049634.3-201ENST00000604968 457 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 AC022149.2-201ENST00000621061 203 ntBASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPF3BQ9BZI7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 SNORD9-201ENST00000362566 104 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 RNVU1-14-201ENST00000384770 164 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 RN7SKP53-201ENST00000411337 315 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 MTCO3P21-201ENST00000430791 643 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 AC069277.2-201ENST00000454211 432 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 FTH1P24-201ENST00000503502 462 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 OR4C2P-201ENST00000530855 1064 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 AC027807.1-201ENST00000559921 996 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 Z82195.1-201ENST00000604558 398 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 GMCL1P2-201ENST00000605230 823 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 U4.6-201ENST00000621618 127 ntBASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF3BQ9BZI7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPF3BQ9BZI7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms