Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC138649.3-201ENST00000622154 254 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 MIR6719-201ENST00000622428 87 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 OR11H2-202ENST00000641517 1085 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 OR5H6-203ENST00000642105 978 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC008758.3-201ENST00000507003 1829 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM55Q9BYV6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM55Q9BYV6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM55Q9BYV6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM55Q9BYV6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC018809.2-201ENST00000602436 3823 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 SELENOWP1-201ENST00000322792 252 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 Y_RNA.46-201ENST00000362695 102 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RNA5SP500-201ENST00000364486 119 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 MIR130A-201ENST00000385274 89 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RNA5SP241-201ENST00000391326 114 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 OR7E101P-201ENST00000400428 513 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL356421.1-201ENST00000403255 413 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RPL7P25-201ENST00000404151 721 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 SPA17P1-201ENST00000416656 452 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC004690.1-201ENST00000418216 328 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RPEP2-201ENST00000432149 701 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 COX6B1P2-201ENST00000489624 230 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL049874.2-201ENST00000492636 288 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RPL9P6-201ENST00000492764 598 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC023424.1-201ENST00000496058 459 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 MTCO2P4-201ENST00000517968 247 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 MED28P5-201ENST00000528254 438 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 PTP4A1P6-201ENST00000531034 478 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 DPPA2P4-201ENST00000563717 878 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 HMGN1P30-201ENST00000589286 268 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC067852.4-201ENST00000590314 478 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL589674.2-201ENST00000604304 337 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 FAM27E4-201ENST00000605259 342 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL596275.2-204ENST00000641628 552 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AL596275.2-206ENST00000641957 626 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 AC011755.1-201ENST00000623763 2049 ntBASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM55Q9BYV6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 FARSBP1-201ENST00000435808 1778 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 RNY4P34-201ENST00000364779 95 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 MIR143-201ENST00000385300 106 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 FCF1P10-201ENST00000407590 479 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 MIR548F1-201ENST00000408667 84 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR3A2-201ENST00000408891 1076 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms