| MUC4 | Q99102 | AC005229.2-201 | ENST00000456995 | 399 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL034349.1-201 | ENST00000458367 | 549 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RN7SL807P-201 | ENST00000470923 | 297 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | NPM1P17-201 | ENST00000479221 | 602 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC093903.1-201 | ENST00000507220 | 405 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | HMGN1P15-201 | ENST00000513870 | 295 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | THEM7P-202 | ENST00000525689 | 764 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC116535.2-201 | ENST00000532365 | 441 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | OR5B10P-201 | ENST00000532869 | 642 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC025423.2-201 | ENST00000537570 | 439 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL133166.1-202 | ENST00000550975 | 565 nt | TSL 4 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC105020.2-201 | ENST00000564683 | 572 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC011461.1-201 | ENST00000592671 | 357 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC110741.2-201 | ENST00000605278 | 268 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC092354.2-201 | ENST00000607786 | 514 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | ARHGAP28-207 | ENST00000532996 | 1859 nt | TSL 1 (best) BASIC | 2.67 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | MRPL42-206 | ENST00000549982 | 15582 nt | APPRIS P2 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CD36-221 | ENST00000534394 | 1741 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | MCF2-203 | ENST00000370576 | 3688 nt | APPRIS P3 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | OR56A3-203 | ENST00000641160 | 4438 nt | APPRIS P1 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | LINC02426-201 | ENST00000550506 | 1372 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | TMEM67-202 | ENST00000409623 | 3255 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | TDRD1-202 | ENST00000369280 | 4062 nt | APPRIS ALT2 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | POPDC3-201 | ENST00000254765 | 1345 nt | APPRIS P1 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | GPRC6A-202 | ENST00000368549 | 2622 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | IL18R1-202 | ENST00000334376 | 537 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RNA5SP267-201 | ENST00000364893 | 126 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | MIR30B-201 | ENST00000384850 | 88 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL136116.1-201 | ENST00000403591 | 381 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | U3.39-201 | ENST00000408569 | 239 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC098484.2-201 | ENST00000414339 | 601 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC062031.1-201 | ENST00000414967 | 747 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RPL7P44-201 | ENST00000424827 | 742 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | HIGD1AP12-201 | ENST00000427832 | 281 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | DCLRE1CP1-201 | ENST00000454630 | 470 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RPL21P10-201 | ENST00000463521 | 490 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RPL7P23-201 | ENST00000493874 | 747 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | WBP1LP4-201 | ENST00000505043 | 344 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CERS3-AS1-202 | ENST00000560718 | 432 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CYP2C60P-201 | ENST00000566088 | 139 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC004147.3-201 | ENST00000577709 | 375 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC064805.2-201 | ENST00000582959 | 523 nt | TSL 4 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL139286.1-201 | ENST00000604465 | 483 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL356130.2-201 | ENST00000612554 | 404 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | UBE2E2-207 | ENST00000628311 | 267 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | C20orf24-208 | ENST00000639924 | 351 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RTKN2-202 | ENST00000373789 | 6641 nt | APPRIS P1 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | NEGR1-201 | ENST00000306821 | 5577 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | PRO1804-201 | ENST00000623780 | 2050 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | ELAVL2-204 | ENST00000397312 | 3805 nt | APPRIS P3 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC114546.3-201 | ENST00000623582 | 1734 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | RNU4-7P-201 | ENST00000364758 | 141 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CDKL4-202 | ENST00000395035 | 1140 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC017079.2-201 | ENST00000416102 | 485 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC096644.3-201 | ENST00000416788 | 338 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL691447.1-201 | ENST00000419456 | 387 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | SAGE2P-201 | ENST00000420011 | 2126 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC017074.1-201 | ENST00000424612 | 561 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | LINC01857-201 | ENST00000429730 | 492 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | SEPT7P6-201 | ENST00000469999 | 1143 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC007688.1-201 | ENST00000475592 | 759 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC106707.2-201 | ENST00000484182 | 374 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | HAUS1P1-201 | ENST00000505275 | 832 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | ZNF84-212 | ENST00000542874 | 540 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | MIR4512-201 | ENST00000583257 | 77 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC103987.2-201 | ENST00000583436 | 417 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC097467.3-207 | ENST00000602249 | 725 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AD001527.1-201 | ENST00000604228 | 379 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC010680.4-201 | ENST00000605334 | 543 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | SNORA62.6-201 | ENST00000606322 | 83 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | MIR8057-201 | ENST00000620957 | 69 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC006386.2-201 | ENST00000624491 | 75 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC012005.1-201 | ENST00000624575 | 75 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | FRYL-205 | ENST00000503238 | 11103 nt | APPRIS P1 TSL 5 BASIC | 2.65 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AC007656.2-201 | ENST00000624902 | 4547 nt | BASIC | 2.65 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | LPP-221 | ENST00000618621 | 18277 nt | TSL 1 (best) BASIC | 2.65 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | LPP-222 | ENST00000640853 | 18277 nt | APPRIS P1 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | AL353746.1-201 | ENST00000566293 | 6881 nt | BASIC | 2.65 | □□□□□ -1.98 | | |
| MUC4 | Q99102 | CCDC146-201 | ENST00000285871 | 3333 nt | APPRIS P2 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | MTND4LP20-201 | ENST00000402379 | 270 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | MTHFD2P2-201 | ENST00000407725 | 247 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC245054.1-201 | ENST00000420944 | 258 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC073464.3-201 | ENST00000422564 | 712 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC074327.1-201 | ENST00000448017 | 540 nt | TSL 2 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC010486.1-201 | ENST00000511793 | 424 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | LINC02278-201 | ENST00000512170 | 500 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | IGHV3-32-201 | ENST00000519182 | 355 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | RGS5-206 | ENST00000527988 | 373 nt | TSL 1 (best) BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC009704.1-201 | ENST00000583702 | 331 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | TNPO1P3-201 | ENST00000436471 | 2662 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | LINC01222-201 | ENST00000427439 | 1785 nt | TSL 2 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC025125.1-201 | ENST00000624743 | 1922 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | TOP2A-201 | ENST00000423485 | 5758 nt | APPRIS P1 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | GTF2H1-204 | ENST00000524753 | 1510 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | CDH8-205 | ENST00000577730 | 8009 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | TRIM36-201 | ENST00000282369 | 4050 nt | APPRIS P1 TSL 1 (best) BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | CFHR2-201 | ENST00000367415 | 1059 nt | APPRIS P2 TSL 1 (best) BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | RNVU1-14-201 | ENST00000384770 | 164 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC4 | Q99102 | AC239803.1-203 | ENST00000411978 | 452 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |