Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 RN7SKP123-201ENST00000410732 291 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC007899.1-201ENST00000412776 775 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AL592293.2-201ENST00000422292 996 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC245028.1-201ENST00000423259 256 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 CYCSP42-201ENST00000450823 238 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 RPS29P22-201ENST00000472363 168 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC007688.1-201ENST00000475592 759 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC007686.1-201ENST00000488511 463 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 RN7SKP21-201ENST00000516503 220 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 RN7SKP234-201ENST00000517173 224 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 MIR4474-201ENST00000579189 78 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC022884.3-201ENST00000579571 248 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC008507.1-201ENST00000587506 734 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AL445567.2-201ENST00000618935 498 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC019080.5-201ENST00000624891 757 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 AC073073.2-201ENST00000609827 2578 ntBASIC2.65□□□□□ -1.99
AP1S3Q96PC3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
AP1S3Q96PC3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 SNORA70E-201ENST00000384492 135 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 U3.22-201ENST00000391120 215 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RBMY2KP-201ENST00000418221 992 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RCC2P2-201ENST00000422174 918 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL513174.1-201ENST00000423182 629 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 BX890604.2-201ENST00000427883 474 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AP000907.1-201ENST00000428428 510 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 YWHAZP7-201ENST00000436906 631 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 NUTF2P3-201ENST00000448540 384 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RPL23AP67-201ENST00000465341 474 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RPL23AP12-201ENST00000467573 473 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC022336.1-201ENST00000475510 337 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RPS4XP13-201ENST00000483219 789 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 ATG10-AS1-201ENST00000504846 648 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 RNU6-579P-201ENST00000516879 102 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AP000619.3-201ENST00000535634 1127 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL163153.1-201ENST00000554223 283 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC023575.1-201ENST00000580510 358 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC092354.2-201ENST00000607786 514 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC007823.1-201ENST00000569932 1566 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
AP1S3Q96PC3 AC008264.2-201ENST00000610193 3731 ntBASIC2.64□□□□□ -1.99
AP1S3Q96PC3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 RLIMP1-201ENST00000339626 1680 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL353743.4-201ENST00000422653 1547 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 RNA5SP42-201ENST00000364278 115 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL022722.2-201ENST00000402519 180 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 U3.39-201ENST00000408569 239 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 OR8G2P-201ENST00000412796 908 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 DPPA2P1-201ENST00000428060 556 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 UBE2V2P4-201ENST00000447495 259 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC146507.1-201ENST00000468335 354 ntBASIC2.63□□□□□ -1.99
AP1S3Q96PC3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.63□□□□□ -1.99
AP1S3Q96PC3 AC093267.1-201ENST00000489176 961 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms