Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SETP11-201ENST00000473027 690 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC104689.1-201ENST00000473356 768 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 SNORA48.10-201ENST00000516965 160 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 IGKV1-32-201ENST00000519290 311 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC023161.2-201ENST00000551218 780 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 BGLT3-201ENST00000564523 994 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 MIR4480-201ENST00000582492 71 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 VN1R84P-201ENST00000593697 235 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC025165.5-201ENST00000602802 578 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC112220.3-201ENST00000605502 502 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC090425.2-201ENST00000608818 501 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 MIR6820-201ENST00000611508 62 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC108751.5-201ENST00000492880 1336 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC107982.1-201ENST00000507171 1300 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC103591.2-201ENST00000265259 766 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 RNA5SP428-201ENST00000365129 132 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 SNORA2.3-201ENST00000383920 135 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 HSPD1P16-201ENST00000402302 394 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 RPL31P52-201ENST00000407532 367 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 TPT1P2-201ENST00000413105 503 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 TMBIM7P-201ENST00000418074 855 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC092634.6-201ENST00000418558 192 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 USP9YP9-201ENST00000429406 715 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 RPL31P54-201ENST00000429803 370 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AP000936.2-201ENST00000447151 681 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 SLC25A18P1-201ENST00000449385 454 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 VN1R32P-201ENST00000452234 905 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 DDX39BP2-208ENST00000453923 258 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 FGF7P3-201ENST00000454645 303 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC010469.1-201ENST00000463864 576 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 RPS29P22-201ENST00000472363 168 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC010683.1-201ENST00000473673 378 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC093281.2-201ENST00000510153 597 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 MTCYBP37-201ENST00000510642 1133 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC008033.2-201ENST00000542626 177 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL121766.1-201ENST00000547436 487 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 RPL21P7-201ENST00000557463 483 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 ACTR3BP3-201ENST00000565577 979 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 MIR4691-201ENST00000583764 85 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AF131215.7-201ENST00000602443 707 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL355816.1-201ENST00000607951 118 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL354760.1-201ENST00000608357 643 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC092653.1-201ENST00000608509 531 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC243756.2-201ENST00000618406 463 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AP006248.2-201ENST00000623309 592 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms