Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC099654.9-201ENST00000637055 678 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC087821.2-201ENST00000637086 450 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC006971.1-201ENST00000407916 4486 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 HMGB1P5-201ENST00000255320 642 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 RNU4-51P-201ENST00000364206 140 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 RNU6-921P-201ENST00000384361 107 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 Y_RNA.578-201ENST00000390903 88 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 GTF2IP3-201ENST00000433887 494 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 MTND1P26-201ENST00000440488 538 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 NPM1P13-201ENST00000452663 865 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 snoU109.3-201ENST00000459477 145 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC006517.1-201ENST00000480485 328 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 GAPDHP36-201ENST00000480688 918 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC005726.1-201ENST00000494679 427 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 SNORA19.3-201ENST00000516165 130 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 RNA5SP73-201ENST00000516744 108 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC091163.3-201ENST00000518269 1144 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC138701.1-201ENST00000524329 714 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AP001922.4-201ENST00000526967 290 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 BRD9P1-201ENST00000529855 560 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 CENPUP2-201ENST00000555897 1186 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC074051.3-201ENST00000570238 358 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 MIR4737-201ENST00000583979 81 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC091057.3-201ENST00000602684 733 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 RNA5SP108-201ENST00000605921 117 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC027449.1-201ENST00000608890 407 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC016597.2-201ENST00000613256 341 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL050303.3-201ENST00000613704 284 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 MIR6719-201ENST00000622428 87 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL157770.1-201ENST00000623049 439 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AL355480.1-201ENST00000629041 99 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC006927.4-201ENST00000639187 543 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC010300.1-201ENST00000600671 5134 ntBASIC3.81□□□□□ -1.8
RFT1Q96AA3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFT1Q96AA3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
RFT1Q96AA3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AL355578.1-201ENST00000607405 1328 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 RNU6-582P-201ENST00000362989 107 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 RNU6-115P-201ENST00000364310 107 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 RNU6-707P-201ENST00000364647 95 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 RNU6-441P-201ENST00000384545 106 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC092832.1-201ENST00000422934 400 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 RBMY1KP-201ENST00000423480 476 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AL732292.1-201ENST00000426692 226 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 Z93242.1-201ENST00000427102 353 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 MTATP6P17-201ENST00000431030 672 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AL049745.1-201ENST00000433953 286 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 UBE2V1P3-201ENST00000439651 417 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 MTCO1P53-201ENST00000441633 699 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 RPL23AP43-201ENST00000446445 471 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 RPL29P29-201ENST00000448725 423 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms