Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.11□□□□□ -1.75
TM9SF4Q92544 AC104446.1-201ENST00000613728 1321 ntBASIC4.11□□□□□ -1.75
TM9SF4Q92544 EIF2AP4-201ENST00000424793 1781 ntBASIC4.11□□□□□ -1.75
TM9SF4Q92544 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TM9SF4Q92544 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TM9SF4Q92544 AC138393.1-206ENST00000540997 1886 ntBASIC4.11□□□□□ -1.75
TM9SF4Q92544 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TM9SF4Q92544 CPHL1P-201ENST00000461341 3407 ntBASIC4.11□□□□□ -1.75
TM9SF4Q92544 AC105074.1-201ENST00000623380 3095 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 LINC00622-201ENST00000562811 1570 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 SNORD116-2-201ENST00000384274 95 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 RNU6-549P-201ENST00000384433 107 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 SNORD116-6-201ENST00000384711 96 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AL022722.2-201ENST00000402519 180 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 OR4K6P-201ENST00000416478 897 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 MTCO3P21-201ENST00000430791 643 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 HSFY6P-201ENST00000445573 403 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 VN1R32P-201ENST00000452234 905 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 RPL7AP52-201ENST00000458096 790 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 RPS7P7-201ENST00000463499 571 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 NDUFB4P12-201ENST00000513465 390 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC026402.1-201ENST00000513642 170 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 OSBPL9P5-201ENST00000542581 171 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC124068.1-201ENST00000563131 678 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 MTND4LP24-201ENST00000572277 291 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC022884.3-201ENST00000579571 248 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AP001269.3-201ENST00000588718 329 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 ZNF92P3-201ENST00000596594 954 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 BNIP3P4-201ENST00000604946 565 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC020634.1-201ENST00000608701 549 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AP002782.1-201ENST00000623107 614 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC009229.4-201ENST00000623854 1947 ntBASIC4.1□□□□□ -1.75
TM9SF4Q92544 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TM9SF4Q92544 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF4Q92544 AC114546.3-201ENST00000623582 1734 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF4Q92544 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF4Q92544 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF4Q92544 AL121657.1-201ENST00000327215 531 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RNU6-83P-201ENST00000384568 112 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RNU6-146P-201ENST00000384602 108 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 MIR3065-201ENST00000390137 79 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 ERHP2-201ENST00000402323 299 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RPL23AP48-201ENST00000406913 488 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 AC092745.2-202ENST00000411880 369 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 Z75741.2-201ENST00000417272 1167 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.09□□□□□ -1.75
TM9SF4Q92544 MTND5P25-201ENST00000430499 799 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 AC234064.1-201ENST00000436312 247 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 RPL23AP43-201ENST00000446445 471 ntBASIC4.09□□□□□ -1.75
TM9SF4Q92544 OR6K5P-201ENST00000447050 945 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms