Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC141257.3-201ENST00000572906 215 ntBASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 BNIP3P4-201ENST00000604946 565 ntBASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 AC078938.1-201ENST00000620993 318 ntBASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 AL359757.2-201ENST00000624309 274 ntBASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 SEC63P2-201ENST00000503863 1939 ntBASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEDD1Q8NHV4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 RPL7P26-201ENST00000333817 754 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 RNU4-2-201ENST00000365668 141 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 SNORD3H-201ENST00000384486 214 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AL589872.1-201ENST00000426602 288 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 Z93242.1-201ENST00000427102 353 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 MRPS21P3-201ENST00000436696 262 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC100832.1-201ENST00000471945 383 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC025674.1-201ENST00000507074 324 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 MRPS35P2-201ENST00000508242 191 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC048346.1-201ENST00000510247 144 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC093303.1-201ENST00000514549 295 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 SCARNA21.2-201ENST00000516600 166 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 SUB1P2-201ENST00000556401 297 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC012616.1-201ENST00000600294 197 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AP001330.4-201ENST00000604350 154 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AL118522.2-201ENST00000616045 615 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 AC007159.1-201ENST00000566529 4706 ntBASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NEDD1Q8NHV4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 OR1S2-201ENST00000302592 978 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC005042.1-201ENST00000393397 800 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC005522.1-201ENST00000395416 346 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AL121834.1-202ENST00000404494 277 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AL009179.1-201ENST00000406085 265 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 SRIP2-201ENST00000428470 166 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 NPM1P34-201ENST00000428821 893 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC109583.1-201ENST00000432156 268 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AL157827.1-201ENST00000447622 132 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AL133445.1-201ENST00000467051 452 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 TRBV1-201ENST00000476502 284 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 SIAH1P1-201ENST00000479411 923 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 RN7SL547P-201ENST00000490793 290 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC023194.1-201ENST00000493084 308 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC090638.1-201ENST00000498296 909 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 RNU6-416P-201ENST00000516265 103 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC016727.2-201ENST00000603988 621 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC112187.2-201ENST00000604345 283 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC093913.1-201ENST00000614178 329 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 MIR8080-201ENST00000622224 89 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC006840.1-201ENST00000623069 542 ntBASIC6.56□□□□□ -1.36
NEDD1Q8NHV4 AC079597.1-201ENST00000624306 508 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms