Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC083899.1-201ENST00000454465 3819 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC106871.1-201ENST00000568324 3102 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 DDX43P2-201ENST00000604753 1354 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 CASC19-204ENST00000641001 2055 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 Y_RNA.18-201ENST00000362461 102 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RNU6-249P-201ENST00000363016 102 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 SUGT1P1-201ENST00000379514 476 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 SNORD116-23-201ENST00000384645 92 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RPL23AP26-201ENST00000412728 464 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 CYCSP10-201ENST00000417973 294 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RPS26P40-201ENST00000435209 294 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RPL23AP35-201ENST00000451906 501 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 MTATP6P22-201ENST00000507369 598 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC093281.2-201ENST00000510153 597 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 HMGB3P13-201ENST00000511263 607 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC008494.2-201ENST00000514544 370 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 SMARCE1P4-201ENST00000523647 241 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 OR5AK1P-201ENST00000524837 922 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AP003033.1-201ENST00000527244 415 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC093519.1-201ENST00000566109 298 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RN7SL176P-201ENST00000580352 264 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AP001981.2-201ENST00000603241 418 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC023813.4-201ENST00000607580 580 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AL139124.1-201ENST00000609123 421 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC245297.2-201ENST00000610119 565 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AL442639.1-201ENST00000625030 1899 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 AL390237.1-201ENST00000404226 1415 ntBASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SMC1BQ8NDV3 CDR1-202ENST00000625883 1485 ntBASIC5.71□□□□□ -1.49
SMC1BQ8NDV3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.71□□□□□ -1.49
SMC1BQ8NDV3 AC092079.1-201ENST00000558620 1985 ntBASIC5.71□□□□□ -1.49
SMC1BQ8NDV3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 OR51H2P-202ENST00000641424 3046 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC032011.1-201ENST00000611703 1549 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 SNORA63.1-201ENST00000362493 131 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 CYCSP19-201ENST00000411715 316 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 MED14P1-201ENST00000430517 648 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 TCEA1P3-201ENST00000443005 880 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC108463.1-201ENST00000450258 347 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC091564.1-201ENST00000464563 479 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 MTND3P5-201ENST00000512798 333 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 HMGN1P9-201ENST00000515212 298 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 RPL12P22-201ENST00000519073 490 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AF279873.1-201ENST00000523393 313 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.71□□□□□ -1.5
SMC1BQ8NDV3 AC138915.2-201ENST00000569776 97 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms