Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP003181.2-201ENST00000528941 181 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AP000907.2-201ENST00000530827 353 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AP003034.1-201ENST00000534621 422 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL049779.2-201ENST00000553847 315 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL355812.1-201ENST00000603215 216 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 MIR4496-201ENST00000635896 61 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AP004607.3-201ENST00000530354 3915 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC008758.3-201ENST00000507003 1829 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 ZNF734P-201ENST00000419494 1534 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC091046.3-201ENST00000631455 1574 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 RNY1P12-201ENST00000364251 105 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 RNU6-359P-201ENST00000365466 108 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 Y_RNA.481-201ENST00000384373 102 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 U3.20-201ENST00000390909 217 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 MIR1250-201ENST00000408098 113 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 RPL7L1P9-201ENST00000431298 745 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC096775.1-201ENST00000437724 448 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 BX276092.4-201ENST00000452056 248 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 RPS3AP14-201ENST00000483907 780 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AL035690.1-201ENST00000490892 383 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC117522.3-201ENST00000507974 584 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AP006245.2-201ENST00000522004 300 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AL049779.3-201ENST00000557141 606 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 UBE2V2P2-201ENST00000587677 504 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 CYCSP1-201ENST00000604815 315 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AL683813.2-201ENST00000605245 502 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC009268.2-201ENST00000621925 457 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC009033.1-201ENST00000624279 431 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 AC024614.3-201ENST00000637860 256 ntBASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NPAS4Q8IUM7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 ZNF652P1-201ENST00000442420 1309 ntBASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPAS4Q8IUM7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 ENSAP1-201ENST00000392855 326 ntBASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 CALM2P3-201ENST00000400429 449 ntBASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 RN7SKP235-201ENST00000410662 305 ntBASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 MTND3P17-201ENST00000416968 344 ntBASIC6.14□□□□□ -1.43
NPAS4Q8IUM7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms