Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPL23AP1-201ENST00000428990 471 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC092013.1-201ENST00000438795 332 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 RPS29P9-201ENST00000440360 171 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AL031584.1-201ENST00000447169 754 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 CCDC75P1-201ENST00000469247 791 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC080014.1-201ENST00000496877 1201 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 KRT19P6-201ENST00000510983 209 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 RPL12P22-201ENST00000519073 490 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC012339.2-201ENST00000523996 453 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC006349.1-201ENST00000555526 235 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC022884.2-201ENST00000578535 580 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AL356218.2-201ENST00000605264 187 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC007497.1-201ENST00000610421 561 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC005332.6-201ENST00000613178 446 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC122133.1-201ENST00000613964 233 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 MLECP1-201ENST00000615893 709 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AF246928.1-201ENST00000623768 87 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC091965.5-201ENST00000624785 342 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 CR381572.2-201ENST00000624852 397 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 NCLP2-201ENST00000416078 1462 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC107982.1-201ENST00000507171 1300 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC087359.1-201ENST00000508335 1740 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RNU6-621P-201ENST00000364752 109 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RNA5SP479-201ENST00000364858 117 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AL390316.1-201ENST00000406279 553 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RSU1P3-201ENST00000412878 835 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RPL36AP10-201ENST00000421785 322 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 MTCO3P1-205ENST00000422088 832 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 MTCYBP39-201ENST00000437562 491 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AL360221.1-201ENST00000445989 335 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RPS5P7-201ENST00000456664 608 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 PPIAP21-201ENST00000464473 501 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 RPL21P71-201ENST00000465598 459 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 SYPL1P1-201ENST00000473622 768 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 PRELID3BP7-201ENST00000503606 469 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC134698.5-201ENST00000519444 336 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 OR5M2P-201ENST00000529003 936 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 EIF5A2P1-201ENST00000564027 460 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC093519.1-201ENST00000566109 298 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 ISCA1P3-201ENST00000577104 373 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC017100.2-201ENST00000584628 355 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC092653.1-201ENST00000608509 531 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC008083.4-201ENST00000615076 444 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 AC007494.3-201ENST00000624660 743 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 OR52H1-202ENST00000641796 1061 ntBASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A4Q53GD3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms