Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ZNF37BP-203ENST00000452306 1352 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 OR56B2P-201ENST00000317102 954 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 MIR93-201ENST00000385024 80 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 U3.30-201ENST00000391308 210 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AL645927.1-201ENST00000396783 406 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 RAC1P3-201ENST00000416129 580 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC062016.2-201ENST00000420950 676 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 RPL7P53-201ENST00000421245 739 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 Z74021.1-201ENST00000423610 407 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 PSMA2P3-201ENST00000429685 675 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 MTND2P20-201ENST00000440805 661 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 SLC31A1P1-201ENST00000451221 567 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 SCARNA10-201ENST00000459255 330 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC004263.1-201ENST00000479327 332 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 RN7SL826P-201ENST00000479724 288 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC104090.1-201ENST00000506341 1171 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC090819.1-201ENST00000523800 1111 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC092470.1-201ENST00000546187 132 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 CENPUP2-201ENST00000555897 1186 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC015912.2-201ENST00000571053 181 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AP001180.3-201ENST00000582221 145 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 DPRXP5-201ENST00000604662 539 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AL158042.1-201ENST00000605338 460 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC026368.1-201ENST00000614934 690 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC092184.1-201ENST00000625042 715 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 AC068254.2-201ENST00000623938 3577 ntBASIC4.82□□□□□ -1.64
CCDC38Q502W7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 RHOT1P2-201ENST00000366423 333 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 RNU1-82P-201ENST00000390851 165 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AL589647.1-201ENST00000402485 466 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AL450338.1-201ENST00000407987 512 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 TIMM9P2-201ENST00000419324 266 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 OR51AB1P-201ENST00000429046 620 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 MTATP6P17-201ENST00000431030 672 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC104073.1-201ENST00000451988 151 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 RN7SL329P-201ENST00000467740 299 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC068587.2-201ENST00000478386 781 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 RPL21P103-201ENST00000479921 488 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC004453.1-201ENST00000487895 408 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 RPL7P38-201ENST00000488396 739 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 OR5BC1P-201ENST00000529327 739 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC133555.2-201ENST00000550213 292 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC022726.1-201ENST00000587475 207 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 NIFKP6-201ENST00000598115 845 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 VN1R82P-201ENST00000601481 356 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC112694.2-201ENST00000623697 768 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 INTS6P1-201ENST00000504674 2530 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC38Q502W7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC38Q502W7 AC130650.2-201ENST00000618736 2403 ntBASIC4.81□□□□□ -1.64
CCDC38Q502W7 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
CCDC38Q502W7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC38Q502W7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC38Q502W7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms