Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RAB9BP1-201ENST00000519581 626 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC133555.2-201ENST00000550213 292 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC010198.2-201ENST00000550612 259 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 YWHAQP7-201ENST00000603536 658 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 COX6CP4-201ENST00000605798 228 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AL392048.1-201ENST00000613946 534 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC067931.1-201ENST00000624190 671 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AL049536.1-201ENST00000625043 744 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC007671.2-201ENST00000637344 619 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 Z99496.1-201ENST00000469424 1477 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 NEAT1-202ENST00000501122 22743 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 DCAF13P1-201ENST00000495256 1330 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 OR56B2P-201ENST00000317102 954 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL590240.1-201ENST00000334118 313 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 RNU1-82P-201ENST00000390851 165 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 RN7SKP106-201ENST00000410832 272 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC114755.2-201ENST00000413520 361 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC245028.1-201ENST00000423259 256 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 RPL21P43-201ENST00000425440 472 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 MTND1P32-201ENST00000433043 938 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL133477.1-201ENST00000457472 514 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC006967.1-201ENST00000467608 589 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 GAPDHP36-201ENST00000480688 918 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 RPS4XP18-201ENST00000495480 763 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC025674.1-201ENST00000507074 324 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 OR51K1P-201ENST00000510214 950 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC018797.3-201ENST00000513388 1241 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 OR8L1P-201ENST00000534005 955 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC087465.1-201ENST00000560574 245 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 MIR4666A-201ENST00000580160 79 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL391358.1-201ENST00000605342 190 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC080013.3-201ENST00000606839 578 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC097505.1-201ENST00000610199 565 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 MIR6853-201ENST00000619642 74 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC006065.5-201ENST00000623427 349 ntBASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LONRF3Q496Y0 AL133243.3-201ENST00000617415 3004 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC079741.1-201ENST00000321498 212 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RNU6-707P-201ENST00000364647 95 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RNU6-441P-201ENST00000384545 106 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RN7SKP100-201ENST00000411258 284 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RSU1P3-201ENST00000412878 835 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC119751.6-201ENST00000416712 186 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 CYCSP10-201ENST00000417973 294 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 317.2 ms