Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORA37-201ENST00000384504 129 ntBASIC4.26□□□□□ -1.73
LTBQ06643 Y_RNA.553-201ENST00000384670 102 ntBASIC4.26□□□□□ -1.73
LTBQ06643 MT-TH-201ENST00000387441 69 ntBASIC4.26□□□□□ -1.73
LTBQ06643 SNORA26.8-201ENST00000391306 124 ntBASIC4.26□□□□□ -1.73
LTBQ06643 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 AL080315.1-201ENST00000406055 466 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AP000357.1-201ENST00000409926 1165 ntBASIC4.26□□□□□ -1.73
LTBQ06643 RNU6-920P-201ENST00000410926 92 ntBASIC4.26□□□□□ -1.73
LTBQ06643 RSU1P3-201ENST00000412878 835 ntBASIC4.26□□□□□ -1.73
LTBQ06643 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 AL049610.1-201ENST00000423374 372 ntBASIC4.26□□□□□ -1.73
LTBQ06643 GTF2IP23-201ENST00000423746 351 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AL158073.1-201ENST00000426848 1104 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 AC007559.1-201ENST00000428736 355 ntBASIC4.26□□□□□ -1.73
LTBQ06643 MTCO1P3-201ENST00000429327 192 ntBASIC4.26□□□□□ -1.73
LTBQ06643 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 AL359265.2-201ENST00000434367 631 ntBASIC4.26□□□□□ -1.73
LTBQ06643 CYCSP11-201ENST00000436426 315 ntBASIC4.26□□□□□ -1.73
LTBQ06643 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.26□□□□□ -1.73
LTBQ06643 RPS24P1-201ENST00000438550 371 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC079168.2-201ENST00000453977 416 ntBASIC4.26□□□□□ -1.73
LTBQ06643 RPS5P7-201ENST00000456664 608 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC010326.1-201ENST00000462726 602 ntBASIC4.26□□□□□ -1.73
LTBQ06643 SETP11-201ENST00000473027 690 ntBASIC4.26□□□□□ -1.73
LTBQ06643 RPL7P18-201ENST00000478965 734 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AL024509.2-201ENST00000493462 493 ntBASIC4.26□□□□□ -1.73
LTBQ06643 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 SCARNA22-201ENST00000503991 125 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC104108.1-201ENST00000509930 412 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC022447.1-201ENST00000515358 464 ntBASIC4.26□□□□□ -1.73
LTBQ06643 Y_RNA.695-201ENST00000516715 107 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.26□□□□□ -1.73
LTBQ06643 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.26□□□□□ -1.73
LTBQ06643 HIGD1AP10-201ENST00000527837 282 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC124293.1-201ENST00000530034 493 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC105233.3-201ENST00000531125 744 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.26□□□□□ -1.73
LTBQ06643 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.26□□□□□ -1.73
LTBQ06643 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 NIFKP8-201ENST00000560500 874 ntBASIC4.26□□□□□ -1.73
LTBQ06643 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 AC006362.1-201ENST00000567392 174 ntBASIC4.26□□□□□ -1.73
LTBQ06643 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC008759.1-201ENST00000589783 983 ntBASIC4.26□□□□□ -1.73
LTBQ06643 NTAN1P1-201ENST00000603150 646 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC087752.4-201ENST00000605911 462 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC006270.3-201ENST00000605967 1036 ntBASIC4.26□□□□□ -1.73
LTBQ06643 AC024941.1-201ENST00000612250 334 ntBASIC4.26□□□□□ -1.73
LTBQ06643 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LTBQ06643 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.26□□□□□ -1.73
LTBQ06643 AL442639.1-201ENST00000625030 1899 ntBASIC4.26□□□□□ -1.73
LTBQ06643 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LTBQ06643 AP001273.1-201ENST00000624493 3152 ntBASIC4.26□□□□□ -1.73
LTBQ06643 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LTBQ06643 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.26□□□□□ -1.73
LTBQ06643 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LTBQ06643 DDX18P4-201ENST00000511690 1966 ntBASIC4.25□□□□□ -1.73
LTBQ06643 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
LTBQ06643 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.25□□□□□ -1.73
LTBQ06643 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.25□□□□□ -1.73
LTBQ06643 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
LTBQ06643 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.25□□□□□ -1.73
LTBQ06643 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.25□□□□□ -1.73
LTBQ06643 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LTBQ06643 RNU6-185P-201ENST00000384421 107 ntBASIC4.25□□□□□ -1.73
LTBQ06643 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LTBQ06643 RNA5SP80-201ENST00000410475 111 ntBASIC4.25□□□□□ -1.73
LTBQ06643 NRBF2P2-201ENST00000413087 861 ntBASIC4.25□□□□□ -1.73
LTBQ06643 AC009237.10-201ENST00000414112 510 ntBASIC4.25□□□□□ -1.73
LTBQ06643 AC009237.5-201ENST00000414271 501 ntBASIC4.25□□□□□ -1.73
LTBQ06643 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.25□□□□□ -1.73
LTBQ06643 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.25□□□□□ -1.73
LTBQ06643 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.25□□□□□ -1.73
LTBQ06643 FTH1P16-201ENST00000435241 552 ntBASIC4.25□□□□□ -1.73
LTBQ06643 RPL36AP15-201ENST00000444514 266 ntBASIC4.25□□□□□ -1.73
LTBQ06643 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.25□□□□□ -1.73
LTBQ06643 HMGB1P16-201ENST00000447155 540 ntBASIC4.25□□□□□ -1.73
LTBQ06643 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.25□□□□□ -1.73
LTBQ06643 OR1H1P-201ENST00000448731 937 ntBASIC4.25□□□□□ -1.73
LTBQ06643 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.25□□□□□ -1.73
LTBQ06643 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.25□□□□□ -1.73
LTBQ06643 AC022431.1-201ENST00000450941 438 ntBASIC4.25□□□□□ -1.73
LTBQ06643 DNAJC19P8-201ENST00000452887 259 ntBASIC4.25□□□□□ -1.73
LTBQ06643 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
LTBQ06643 NCOR1P1-202ENST00000486162 291 ntBASIC4.25□□□□□ -1.73
LTBQ06643 ARL4AP1-201ENST00000503220 705 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms