Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.32□□□□□ -1.72
GABPAQ06546 AC244258.1-201ENST00000637553 1071 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL392088.2-201ENST00000637607 285 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.32□□□□□ -1.72
GABPAQ06546 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GABPAQ06546 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GABPAQ06546 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 ASNSP1-201ENST00000518311 1939 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 MTND5P11-201ENST00000511037 1812 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.31□□□□□ -1.72
GABPAQ06546 RNU6-796P-201ENST00000391086 107 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 ATP5F1P6-201ENST00000402768 767 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.31□□□□□ -1.72
GABPAQ06546 RPS26P47-201ENST00000427219 348 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.31□□□□□ -1.72
GABPAQ06546 CBX1P4-201ENST00000439415 457 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC092641.1-201ENST00000440229 772 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.31□□□□□ -1.72
GABPAQ06546 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC104687.1-201ENST00000485829 412 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC111193.1-201ENST00000504097 155 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
GABPAQ06546 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GABPAQ06546 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GABPAQ06546 AC025260.1-201ENST00000548858 430 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 RN7SL339P-201ENST00000580597 296 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC005412.1-201ENST00000580812 1049 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC012468.1-201ENST00000604888 430 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC084824.5-201ENST00000612009 413 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 MIR7975-201ENST00000619350 68 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC097372.4-201ENST00000625025 466 ntBASIC4.31□□□□□ -1.72
GABPAQ06546 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.31□□□□□ -1.72
GABPAQ06546 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GABPAQ06546 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.31□□□□□ -1.72
GABPAQ06546 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
GABPAQ06546 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.31□□□□□ -1.72
GABPAQ06546 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
GABPAQ06546 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.3□□□□□ -1.72
GABPAQ06546 AC096656.1-201ENST00000623826 1364 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 MIR16-2-201ENST00000362117 81 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
GABPAQ06546 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC013404.1-201ENST00000413068 249 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC023128.2-201ENST00000420880 1223 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 AL512661.1-201ENST00000434586 1253 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 NDUFB1P1-201ENST00000435191 180 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC092013.1-201ENST00000438795 332 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 AC092685.1-201ENST00000447960 1243 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 PRSS3P4-201ENST00000453323 162 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 RWDD4P1-201ENST00000488019 565 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 SNORA70.18-201ENST00000516696 98 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 MTND1P36-201ENST00000522384 936 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC007458.1-201ENST00000542812 373 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 POLR2KP1-201ENST00000553226 168 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.3□□□□□ -1.72
GABPAQ06546 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.3□□□□□ -1.72
GABPAQ06546 AC093510.2-201ENST00000562820 896 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.3□□□□□ -1.72
GABPAQ06546 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.3□□□□□ -1.72
GABPAQ06546 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 AC010591.1-201ENST00000603941 649 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GABPAQ06546 AL357559.1-201ENST00000622228 274 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
GABPAQ06546 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
GABPAQ06546 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
GABPAQ06546 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.3□□□□□ -1.72
GABPAQ06546 RNF6P1-201ENST00000444889 1784 ntBASIC4.3□□□□□ -1.72
GABPAQ06546 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
GABPAQ06546 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.29□□□□□ -1.72
GABPAQ06546 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AL365440.1-201ENST00000436135 2167 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.29□□□□□ -1.72
GABPAQ06546 OR6K3-202ENST00000368146 996 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 RNU4-27P-201ENST00000410889 139 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 RNU6-603P-201ENST00000411403 107 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms