Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-352P-201ENST00000516908 107 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 OR7E13P-201ENST00000526052 910 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AL163153.1-201ENST00000554223 283 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 OR4U1P-201ENST00000554958 912 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC121761.2-201ENST00000617300 689 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC022079.2-201ENST00000619739 566 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 FP236240.3-201ENST00000623061 327 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC007256.1-201ENST00000392253 2765 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RNU6-697P-201ENST00000363348 107 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RNA5SP235-201ENST00000365411 114 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 DYNLT3P1-201ENST00000378574 347 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RPL23AP47-201ENST00000408017 460 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC013404.1-201ENST00000413068 249 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC012498.1-201ENST00000424037 437 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 DPPA2P1-201ENST00000428060 556 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 OR4C10P-201ENST00000434991 931 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 HMGN2P20-201ENST00000437531 273 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RPL23AP22-201ENST00000437556 453 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 HMGB1P12-201ENST00000438594 598 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL662791.1-201ENST00000441992 928 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC089999.1-201ENST00000460336 374 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC091179.1-201ENST00000461606 579 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 RPS27AP1-201ENST00000475545 471 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC012181.1-201ENST00000479895 423 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 VN1R105P-201ENST00000486595 910 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC093267.1-201ENST00000489176 961 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 HMGB3P14-201ENST00000494195 599 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC114967.1-201ENST00000504890 259 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 HMGB3P15-201ENST00000507326 574 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 PTP4A1P6-201ENST00000531034 478 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 PARP1P2-201ENST00000556806 195 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC027281.1-201ENST00000574178 758 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 MIR4286-201ENST00000580651 93 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC084373.1-201ENST00000603311 235 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL590392.1-201ENST00000604960 446 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC016877.3-201ENST00000606778 504 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL451074.6-201ENST00000608512 729 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AL136164.4-201ENST00000625013 2135 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AP000553.6-201ENST00000641242 118 ntBASIC2.76□□□□□ -1.97
HIST1H1AQ02539 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HIST1H1AQ02539 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RNU6-356P-201ENST00000384140 107 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 MIR30B-201ENST00000384850 88 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 MIR607-201ENST00000385241 96 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC245291.1-201ENST00000419501 328 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AL139247.1-201ENST00000422768 325 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AL591419.1-201ENST00000427423 339 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RPL7P2-201ENST00000427639 268 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RPL23AP69-201ENST00000431134 458 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC007563.3-201ENST00000433233 371 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 NDUFB1P1-201ENST00000435191 180 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 FTH1P1-201ENST00000437933 532 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms