Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.18□□□□□ -1.58
GFRA1P56159 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.18□□□□□ -1.58
GFRA1P56159 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
GFRA1P56159 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.18□□□□□ -1.58
GFRA1P56159 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GFRA1P56159 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA1P56159 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.18□□□□□ -1.58
GFRA1P56159 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 AC114546.3-201ENST00000623582 1734 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 GTF2IP4-201ENST00000453092 2054 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 RNU6-1120P-201ENST00000362988 108 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 RPS4XP8-201ENST00000402039 771 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AL049697.2-201ENST00000403708 294 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 RNU6-908P-201ENST00000410160 94 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 RNA5SP118-201ENST00000410385 109 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 OR2AT2P-201ENST00000413438 905 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC016831.2-201ENST00000417179 352 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 DPPA2P2-201ENST00000418220 897 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 RPS15AP12-201ENST00000419498 388 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC137499.1-201ENST00000427602 88 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 OR7E116P-201ENST00000448529 957 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 PPIAP20-201ENST00000449839 135 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 FDX1P2-201ENST00000450769 375 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 RAD23BP3-201ENST00000454157 1152 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC083798.1-201ENST00000472671 131 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC021382.1-201ENST00000483523 359 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC093815.1-201ENST00000508637 280 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC106872.4-201ENST00000510050 523 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.17□□□□□ -1.58
GFRA1P56159 HIF1AP1-201ENST00000553642 175 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 AC060771.1-201ENST00000582031 164 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AL117336.2-201ENST00000602435 335 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC025588.3-201ENST00000604182 274 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 AL391813.2-201ENST00000609113 322 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 YWHAEP7-203ENST00000622054 312 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 AC011460.1-201ENST00000636268 1834 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 AL137141.1-201ENST00000624622 4836 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA1P56159 AC105074.1-201ENST00000623380 3095 ntBASIC5.17□□□□□ -1.58
GFRA1P56159 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA1P56159 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
GFRA1P56159 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 SAGE4P-201ENST00000442271 3381 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 MIR323A-201ENST00000362199 86 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RNY3P3-201ENST00000363816 102 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RNA5SP242-201ENST00000364171 118 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RNY4P16-201ENST00000364768 94 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RNU6-359P-201ENST00000365466 108 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RNU6-108P-201ENST00000365558 107 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 MIR130A-201ENST00000385274 89 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RPL35AP24-201ENST00000413846 330 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms