Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-251P-201ENST00000363235 104 ntBASIC4.25□□□□□ -1.73
CDH12P55289 SNORA74A-201ENST00000364089 198 ntBASIC4.25□□□□□ -1.73
CDH12P55289 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
CDH12P55289 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 SNORA51.8-201ENST00000384234 132 ntBASIC4.25□□□□□ -1.73
CDH12P55289 RPS3AP26-201ENST00000398259 784 ntBASIC4.25□□□□□ -1.73
CDH12P55289 HNRNPDP2-201ENST00000406475 478 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AL450338.1-201ENST00000407987 512 ntBASIC4.25□□□□□ -1.73
CDH12P55289 RNU6-920P-201ENST00000410926 92 ntBASIC4.25□□□□□ -1.73
CDH12P55289 RN7SKP167-201ENST00000411047 285 ntBASIC4.25□□□□□ -1.73
CDH12P55289 RPL6P29-201ENST00000414863 865 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AL358176.3-201ENST00000420757 454 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 AC010153.1-201ENST00000432862 727 ntBASIC4.25□□□□□ -1.73
CDH12P55289 YWHAZP8-201ENST00000436935 731 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC092013.1-201ENST00000438795 332 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH12P55289 AC073648.4-201ENST00000442655 781 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 H2AFZP5-201ENST00000446960 382 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC073587.1-201ENST00000447093 876 ntBASIC4.25□□□□□ -1.73
CDH12P55289 OR1H1P-201ENST00000448731 937 ntBASIC4.25□□□□□ -1.73
CDH12P55289 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 HMGB1P28-201ENST00000507778 552 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC093281.2-201ENST00000510153 597 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 OR5M2P-201ENST00000529003 936 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AP001880.2-201ENST00000538233 448 ntBASIC4.25□□□□□ -1.73
CDH12P55289 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH12P55289 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 BGLT3-201ENST00000564523 994 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC012435.1-202ENST00000568772 240 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 AL031985.2-201ENST00000600955 480 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH12P55289 AC091946.2-201ENST00000606105 291 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AL008729.2-201ENST00000606393 473 ntBASIC4.25□□□□□ -1.73
CDH12P55289 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 AC073114.1-201ENST00000612027 490 ntBASIC4.25□□□□□ -1.73
CDH12P55289 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDH12P55289 PCMTD1P7-201ENST00000634506 357 ntBASIC4.25□□□□□ -1.73
CDH12P55289 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDH12P55289 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CDH12P55289 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CDH12P55289 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH12P55289 RARSP1-201ENST00000542842 1418 ntBASIC4.24□□□□□ -1.73
CDH12P55289 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH12P55289 RNU6-500P-201ENST00000362349 107 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH12P55289 RNU6-253P-201ENST00000384730 105 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AL078604.1-201ENST00000404609 466 ntBASIC4.24□□□□□ -1.73
CDH12P55289 RSU1P3-201ENST00000412878 835 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH12P55289 COX6B1P1-201ENST00000415962 213 ntBASIC4.24□□□□□ -1.73
CDH12P55289 NPM1P11-201ENST00000417106 855 ntBASIC4.24□□□□□ -1.73
CDH12P55289 TIMM9P2-201ENST00000419324 266 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AC244035.1-201ENST00000430042 390 ntBASIC4.24□□□□□ -1.73
CDH12P55289 RPL23AP25-201ENST00000430973 463 ntBASIC4.24□□□□□ -1.73
CDH12P55289 NRBF2P3-201ENST00000432731 865 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AL590103.1-201ENST00000434488 307 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH12P55289 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 PSMD10P3-201ENST00000437000 448 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AC241584.1-201ENST00000438469 1241 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH12P55289 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH12P55289 OR6C5P-201ENST00000452388 923 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AL645937.3-201ENST00000453647 936 ntBASIC4.24□□□□□ -1.73
CDH12P55289 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH12P55289 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
CDH12P55289 RPL7P9-201ENST00000468715 747 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms