Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 IGKV2-23-201ENST00000518729 323 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR2JP52435 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR2JP52435 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR2JP52435 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR2JP52435 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR2JP52435 MIR3160-1-201ENST00000577972 85 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 MIR4276-201ENST00000584832 70 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR2JP52435 AC010857.1-201ENST00000606398 594 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC011816.2-201ENST00000607089 556 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC000123.2-201ENST00000623124 461 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC244258.1-201ENST00000637553 1071 ntBASIC3.06□□□□□ -1.92
POLR2JP52435 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR2JP52435 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR2JP52435 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
POLR2JP52435 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 OR10AB1P-202ENST00000641219 1686 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 MTCO1P14-201ENST00000441695 1559 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
POLR2JP52435 RNA5SP124-201ENST00000362739 110 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
POLR2JP52435 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR2JP52435 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR2JP52435 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 AC122718.1-201ENST00000439448 744 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 AP002884.2-201ENST00000471647 395 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 RPL21P13-201ENST00000488305 481 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 AC093663.1-201ENST00000497190 394 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 RN7SKP21-201ENST00000516503 220 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR2JP52435 OR5B10P-201ENST00000532869 642 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR2JP52435 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR2JP52435 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
POLR2JP52435 AC024941.1-201ENST00000612250 334 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 ZNF826P-207ENST00000622273 1910 ntBASIC3.05□□□□□ -1.92
POLR2JP52435 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2JP52435 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
POLR2JP52435 AL451142.2-201ENST00000429076 2090 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
POLR2JP52435 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 RNA5SP515-201ENST00000364570 118 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 MIR218-2-201ENST00000385006 110 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 CYCSP19-201ENST00000411715 316 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 HMGN1P24-201ENST00000412282 298 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 RAB9AP3-201ENST00000412737 573 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR2JP52435 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR2JP52435 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 AC099063.2-201ENST00000446360 662 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 RAB9AP1-201ENST00000449393 573 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR2JP52435 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR2JP52435 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR2JP52435 AC021678.1-201ENST00000505195 936 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2JP52435 HMGN1P15-201ENST00000513870 295 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2JP52435 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.04□□□□□ -1.92
POLR2JP52435 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2JP52435 HIGD1AP1-201ENST00000550979 275 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.04□□□□□ -1.92
POLR2JP52435 AL845331.3-202ENST00000562856 261 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2JP52435 MIR5186-201ENST00000577504 120 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 AC010680.3-201ENST00000604215 520 ntBASIC3.04□□□□□ -1.92
POLR2JP52435 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2JP52435 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2JP52435 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR2JP52435 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
POLR2JP52435 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
POLR2JP52435 BX323014.1-201ENST00000412876 237 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
POLR2JP52435 AL049610.1-201ENST00000423374 372 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 HMGN2P7-201ENST00000456186 273 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR2JP52435 SEPT7P6-201ENST00000469999 1143 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.03□□□□□ -1.92
POLR2JP52435 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR2JP52435 DUX4L52-201ENST00000549363 777 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR2JP52435 TRAV37-201ENST00000553906 342 ntBASIC3.03□□□□□ -1.92
POLR2JP52435 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR2JP52435 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms