Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN9P43378 AL132765.1-201ENST00000434165 553 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC004865.1-201ENST00000442276 1003 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 SETD6P1-201ENST00000444575 317 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 OR6K5P-201ENST00000447050 945 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 RPL7P59-201ENST00000447700 943 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 EIF4A1P11-201ENST00000451239 222 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 MTND2P28-201ENST00000457540 1044 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AC079395.1-201ENST00000510981 262 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 RNU6-488P-201ENST00000515918 99 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AP003461.1-201ENST00000528866 78 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN9P43378 AL352979.3-201ENST00000553515 247 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC068831.4-201ENST00000556118 109 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 DUXAP1-201ENST00000556632 463 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 MIR4700-201ENST00000578311 74 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC017100.2-201ENST00000584628 355 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC005191.1-201ENST00000603950 358 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC009220.3-201ENST00000604318 586 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC080013.3-201ENST00000606839 578 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN9P43378 AL451074.6-201ENST00000608512 729 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 MIR6820-201ENST00000611508 62 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PTPN9P43378 RN7SL722P-201ENST00000617780 284 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 uc_338.13-201ENST00000618243 179 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 RN7SL565P-201ENST00000618246 284 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AL023881.1-201ENST00000621088 301 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC022079.1-201ENST00000621546 602 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AC007490.1-201ENST00000624321 703 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AL512506.2-201ENST00000624472 458 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN9P43378 BMS1P21-201ENST00000634565 365 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 FP325313.1-201ENST00000638228 703 ntBASIC4.56□□□□□ -1.68
PTPN9P43378 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN9P43378 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN9P43378 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN9P43378 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN9P43378 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN9P43378 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN9P43378 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 DCAF13P3-201ENST00000561147 1334 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN9P43378 RNU6-1066P-201ENST00000363573 105 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RNU6-621P-201ENST00000364752 109 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 SNORD116-23-201ENST00000384645 92 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RNU6-1300P-201ENST00000391046 108 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.55□□□□□ -1.68
PTPN9P43378 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN9P43378 RNA5SP80-201ENST00000410475 111 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 MIR1911-201ENST00000410783 80 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 RPL26P29-201ENST00000415623 438 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC006960.1-201ENST00000419980 153 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 MFSD13B-201ENST00000420133 1290 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RPL7P53-201ENST00000421245 739 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 IPMKP1-201ENST00000425988 855 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC011998.1-201ENST00000433403 117 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AC093155.1-201ENST00000440164 826 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 EEF1A1P1-201ENST00000447052 739 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 COX6CP18-201ENST00000448769 222 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 Z99714.1-201ENST00000450463 807 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 NDUFA12P1-201ENST00000455914 406 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN9P43378 RN7SL810P-201ENST00000493031 276 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AC116353.3-201ENST00000511215 249 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC109445.1-201ENST00000512356 383 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RNU6-1129P-201ENST00000515964 104 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RNU6-1225P-201ENST00000516336 65 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 RN7SKP96-201ENST00000516948 297 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN9P43378 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.55□□□□□ -1.68
PTPN9P43378 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN9P43378 SMARCE1P4-201ENST00000523647 241 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AP000926.4-201ENST00000527351 454 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 OR5BC1P-201ENST00000529327 739 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms