Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC025884.1-201ENST00000556034 378 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC090695.1-201ENST00000561269 1222 ntBASIC4.83□□□□□ -1.64
CIITAP33076 CYP2C60P-201ENST00000566088 139 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.83□□□□□ -1.64
CIITAP33076 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.83□□□□□ -1.64
CIITAP33076 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 IPO5P1-202ENST00000600039 287 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC125494.3-201ENST00000602759 455 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC069304.3-201ENST00000603938 1084 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AP003392.5-201ENST00000607857 415 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC245008.1-201ENST00000608123 476 ntBASIC4.83□□□□□ -1.64
CIITAP33076 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC009704.2-201ENST00000618739 483 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
CIITAP33076 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.83□□□□□ -1.64
CIITAP33076 AC024595.1-201ENST00000623088 387 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AC067852.7-201ENST00000623270 535 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AL596275.2-204ENST00000641628 552 ntBASIC4.83□□□□□ -1.64
CIITAP33076 AL596275.2-206ENST00000641957 626 ntBASIC4.83□□□□□ -1.64
CIITAP33076 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CIITAP33076 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CIITAP33076 SEC63P2-201ENST00000503863 1939 ntBASIC4.83□□□□□ -1.64
CIITAP33076 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
CIITAP33076 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.83□□□□□ -1.64
CIITAP33076 USP9YP4-201ENST00000424401 1745 ntBASIC4.83□□□□□ -1.64
CIITAP33076 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 LINC01109-201ENST00000603837 3081 ntBASIC4.83□□□□□ -1.64
CIITAP33076 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CIITAP33076 AC134882.1-201ENST00000603738 1676 ntBASIC4.83□□□□□ -1.64
CIITAP33076 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CIITAP33076 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.83□□□□□ -1.64
CIITAP33076 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 AC104454.1-201ENST00000421341 1401 ntBASIC4.82□□□□□ -1.64
CIITAP33076 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 LARP1BP1-201ENST00000506036 1359 ntBASIC4.82□□□□□ -1.64
CIITAP33076 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 AL592437.2-201ENST00000421655 2434 ntBASIC4.82□□□□□ -1.64
CIITAP33076 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 AC011155.1-201ENST00000316512 456 ntBASIC4.82□□□□□ -1.64
CIITAP33076 MIR383-201ENST00000362257 73 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 AL079342.2-201ENST00000403367 482 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AL590084.1-201ENST00000407885 387 ntBASIC4.82□□□□□ -1.64
CIITAP33076 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 Z75741.2-201ENST00000417272 1167 ntBASIC4.82□□□□□ -1.64
CIITAP33076 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.82□□□□□ -1.64
CIITAP33076 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 COX7BP2-201ENST00000437976 242 ntBASIC4.82□□□□□ -1.64
CIITAP33076 NPM1P13-201ENST00000452663 865 ntBASIC4.82□□□□□ -1.64
CIITAP33076 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 APOOP2-201ENST00000461561 539 ntBASIC4.82□□□□□ -1.64
CIITAP33076 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 BET1P1-201ENST00000482276 359 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC113430.1-201ENST00000506872 718 ntBASIC4.82□□□□□ -1.64
CIITAP33076 PGBD4P4-201ENST00000509673 613 ntBASIC4.82□□□□□ -1.64
CIITAP33076 MTCO3P28-201ENST00000513351 515 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 RNU6-1129P-201ENST00000515964 104 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC008694.2-201ENST00000517591 306 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.82□□□□□ -1.64
CIITAP33076 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 AL442163.2-201ENST00000553912 710 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.82□□□□□ -1.64
CIITAP33076 AC109446.2-201ENST00000567872 497 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 AP005136.1-201ENST00000579765 429 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CIITAP33076 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 AC010620.1-201ENST00000601088 1102 ntBASIC4.82□□□□□ -1.64
CIITAP33076 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.82□□□□□ -1.64
CIITAP33076 MIR1322-201ENST00000638013 71 ntBASIC4.82□□□□□ -1.64
CIITAP33076 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
CIITAP33076 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.81□□□□□ -1.64
CIITAP33076 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 RSL24D1P4-201ENST00000400938 484 ntBASIC4.81□□□□□ -1.64
CIITAP33076 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.81□□□□□ -1.64
CIITAP33076 AC091390.1-201ENST00000433904 331 ntBASIC4.81□□□□□ -1.64
CIITAP33076 MTND4P32-201ENST00000437189 1237 ntBASIC4.81□□□□□ -1.64
CIITAP33076 AL008629.1-201ENST00000438615 184 ntBASIC4.81□□□□□ -1.64
CIITAP33076 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.81□□□□□ -1.64
CIITAP33076 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CIITAP33076 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.81□□□□□ -1.64
CIITAP33076 AC005008.1-201ENST00000456151 612 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms