Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 RPS26P8-201ENST00000393490 348 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 RN7SKP33-201ENST00000410942 340 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC244098.2-201ENST00000422068 99 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 ELOCP18-201ENST00000434209 337 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC006994.1-201ENST00000438212 839 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 ELOCP8-201ENST00000439309 332 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 ELOCP15-201ENST00000442090 332 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 HMGN3P1-201ENST00000453847 193 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 PRDX3P4-201ENST00000470828 747 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC068587.1-201ENST00000483613 781 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 TPT1P3-201ENST00000492841 512 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 NIFKP8-201ENST00000560500 874 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC079171.1-201ENST00000568788 914 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 BPTFP1-201ENST00000579209 492 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC012417.1-201ENST00000582307 1039 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC007687.1-201ENST00000602704 304 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC092653.1-201ENST00000608509 531 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC090246.1-201ENST00000616499 426 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC010608.2-201ENST00000624830 470 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
HLA-DPA1P20036 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AL359893.1-201ENST00000447628 1580 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RNA5SP189-201ENST00000364920 115 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RHOT1P2-201ENST00000366423 333 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RNU6-1226P-201ENST00000384317 107 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 MTCO2P1-201ENST00000424648 477 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 CDC42P1-201ENST00000456658 548 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RPL7P19-201ENST00000469948 618 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC108043.1-201ENST00000512696 574 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC104057.1-201ENST00000515547 497 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RNU6-334P-201ENST00000517072 102 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 IGKV2-38-201ENST00000517443 247 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 MYL12AP1-201ENST00000518490 515 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC113192.3-201ENST00000529152 742 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC133794.1-201ENST00000602731 914 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AL020997.3-201ENST00000602843 359 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AC092474.3-201ENST00000603022 568 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 AL451044.1-201ENST00000604867 238 ntBASIC4.12□□□□□ -1.75
HLA-DPA1P20036 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPA1P20036 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms