Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGA1P17096 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGA1P17096 OR10J6P-201ENST00000289731 930 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMGA1P17096 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGA1P17096 MIR422A-201ENST00000362286 90 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC104297.1-201ENST00000393779 870 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 UBA52P6-201ENST00000399822 382 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AMD1P2-201ENST00000412936 992 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 OR4K6P-201ENST00000416478 897 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC093698.1-201ENST00000423843 571 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 SETP10-201ENST00000424368 814 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 AC069540.1-201ENST00000446320 988 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 CCDC75P1-201ENST00000469247 791 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 AP001636.2-201ENST00000525517 696 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGA1P17096 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGA1P17096 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGA1P17096 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGA1P17096 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC006539.2-201ENST00000601729 572 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC135507.2-201ENST00000612443 309 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AL162274.2-201ENST00000614406 332 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 CR392039.4-201ENST00000624968 501 ntBASIC3.34□□□□□ -1.87
HMGA1P17096 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGA1P17096 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGA1P17096 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGA1P17096 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGA1P17096 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HMGA1P17096 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HMGA1P17096 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HMGA1P17096 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGA1P17096 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HMGA1P17096 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HMGA1P17096 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
HMGA1P17096 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HMGA1P17096 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGA1P17096 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HMGA1P17096 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGA1P17096 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HMGA1P17096 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HMGA1P17096 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HMGA1P17096 MIR423-201ENST00000362201 94 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGA1P17096 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGA1P17096 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGA1P17096 AP000936.3-201ENST00000438127 255 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 THAP12P8-201ENST00000447914 2115 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGA1P17096 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGA1P17096 RPL6P9-201ENST00000466502 859 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGA1P17096 AC008885.1-201ENST00000514930 301 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGA1P17096 AC025946.2-201ENST00000603398 234 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGA1P17096 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGA1P17096 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGA1P17096 AL031985.3-201ENST00000565390 2449 ntBASIC3.33□□□□□ -1.88
HMGA1P17096 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGA1P17096 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGA1P17096 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 RPS12P5-201ENST00000423449 371 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 MTCO1P45-201ENST00000431457 267 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 AC009263.1-201ENST00000441193 1239 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 MRPS31P2-201ENST00000451581 518 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGA1P17096 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGA1P17096 ARL2BPP6-201ENST00000512757 439 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 RN7SKP60-201ENST00000516985 239 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGA1P17096 PSMA2P1-201ENST00000526365 646 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 AC113192.3-201ENST00000529152 742 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGA1P17096 AC087888.1-201ENST00000550884 1254 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 AL034351.1-201ENST00000605288 668 ntBASIC3.32□□□□□ -1.88
HMGA1P17096 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGA1P17096 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMGA1P17096 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA1P17096 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMGA1P17096 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA1P17096 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA1P17096 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGA1P17096 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms