Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.45□□□□□ -1.54
CFTRP13569 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.45□□□□□ -1.54
CFTRP13569 BNIP3P38-201ENST00000601117 544 ntBASIC5.45□□□□□ -1.54
CFTRP13569 NRBF2P5-201ENST00000603087 788 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL096803.3-201ENST00000609032 532 ntBASIC5.45□□□□□ -1.54
CFTRP13569 MIR486-1-201ENST00000612171 68 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL451142.2-201ENST00000429076 2090 ntBASIC5.44□□□□□ -1.54
CFTRP13569 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.44□□□□□ -1.54
CFTRP13569 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 AL136360.1-201ENST00000503377 1900 ntBASIC5.44□□□□□ -1.54
CFTRP13569 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CFTRP13569 SNORA71.1-201ENST00000364523 117 ntBASIC5.44□□□□□ -1.54
CFTRP13569 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CFTRP13569 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 DNAJC19P1-201ENST00000455312 319 ntBASIC5.44□□□□□ -1.54
CFTRP13569 HMGN2P7-201ENST00000456186 273 ntBASIC5.44□□□□□ -1.54
CFTRP13569 AC022795.1-201ENST00000473808 480 ntBASIC5.44□□□□□ -1.54
CFTRP13569 AC021205.2-201ENST00000480069 347 ntBASIC5.44□□□□□ -1.54
CFTRP13569 RPS4XP13-201ENST00000483219 789 ntBASIC5.44□□□□□ -1.54
CFTRP13569 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CFTRP13569 AC009812.2-201ENST00000517657 457 ntBASIC5.44□□□□□ -1.54
CFTRP13569 AP000859.1-201ENST00000525536 307 ntBASIC5.44□□□□□ -1.54
CFTRP13569 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CFTRP13569 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.44□□□□□ -1.54
CFTRP13569 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.43□□□□□ -1.54
CFTRP13569 SKP1P1-201ENST00000438081 489 ntBASIC5.43□□□□□ -1.54
CFTRP13569 AL133477.1-201ENST00000457472 514 ntBASIC5.43□□□□□ -1.54
CFTRP13569 AL035404.1-201ENST00000497982 568 ntBASIC5.43□□□□□ -1.54
CFTRP13569 SNORA70.19-201ENST00000516717 90 ntBASIC5.43□□□□□ -1.54
CFTRP13569 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.43□□□□□ -1.54
CFTRP13569 AL512310.1-201ENST00000548639 172 ntBASIC5.43□□□□□ -1.54
CFTRP13569 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.43□□□□□ -1.54
CFTRP13569 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.43□□□□□ -1.54
CFTRP13569 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.43□□□□□ -1.54
CFTRP13569 AC099506.2-201ENST00000623074 221 ntBASIC5.43□□□□□ -1.54
CFTRP13569 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CFTRP13569 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CFTRP13569 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CFTRP13569 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFTRP13569 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.42□□□□□ -1.54
CFTRP13569 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFTRP13569 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
CFTRP13569 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CFTRP13569 RNA5SP184-201ENST00000411071 108 ntBASIC5.42□□□□□ -1.54
CFTRP13569 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.42□□□□□ -1.54
CFTRP13569 AL121890.1-201ENST00000435457 205 ntBASIC5.42□□□□□ -1.54
CFTRP13569 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.42□□□□□ -1.54
CFTRP13569 SLC31A1P1-201ENST00000451221 567 ntBASIC5.42□□□□□ -1.54
CFTRP13569 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.42□□□□□ -1.54
CFTRP13569 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.42□□□□□ -1.54
CFTRP13569 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.42□□□□□ -1.54
CFTRP13569 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
CFTRP13569 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.42□□□□□ -1.54
CFTRP13569 HIGD1AP13-201ENST00000509878 289 ntBASIC5.42□□□□□ -1.54
CFTRP13569 HNRNPKP5-201ENST00000515300 253 ntBASIC5.42□□□□□ -1.54
CFTRP13569 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.42□□□□□ -1.54
CFTRP13569 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.42□□□□□ -1.54
CFTRP13569 ELOCP29-201ENST00000588193 334 ntBASIC5.42□□□□□ -1.54
CFTRP13569 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFTRP13569 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.42□□□□□ -1.54
CFTRP13569 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CFTRP13569 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CFTRP13569 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 XGY1-201ENST00000381172 446 ntBASIC5.41□□□□□ -1.54
CFTRP13569 NACAP7-201ENST00000407371 609 ntBASIC5.41□□□□□ -1.54
CFTRP13569 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.41□□□□□ -1.54
CFTRP13569 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.41□□□□□ -1.54
CFTRP13569 RPL23AP67-201ENST00000465341 474 ntBASIC5.41□□□□□ -1.54
CFTRP13569 AC117440.1-201ENST00000474107 571 ntBASIC5.41□□□□□ -1.54
CFTRP13569 FCF1P3-201ENST00000496394 590 ntBASIC5.41□□□□□ -1.54
CFTRP13569 RNA5SP367-201ENST00000516557 118 ntBASIC5.41□□□□□ -1.54
CFTRP13569 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.41□□□□□ -1.54
CFTRP13569 COX6B1P6-201ENST00000522347 255 ntBASIC5.41□□□□□ -1.54
CFTRP13569 AL139174.1-201ENST00000531489 886 ntBASIC5.41□□□□□ -1.54
CFTRP13569 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
CFTRP13569 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.41□□□□□ -1.54
CFTRP13569 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFTRP13569 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CFTRP13569 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CFTRP13569 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CFTRP13569 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CFTRP13569 AC096644.4-201ENST00000563417 2912 ntBASIC5.4□□□□□ -1.54
CFTRP13569 RPL6P21-201ENST00000418672 846 ntBASIC5.4□□□□□ -1.54
CFTRP13569 AC117434.1-201ENST00000419971 836 ntBASIC5.4□□□□□ -1.54
CFTRP13569 RN7SL93P-201ENST00000463035 293 ntBASIC5.4□□□□□ -1.54
CFTRP13569 AC010306.1-201ENST00000523223 1117 ntBASIC5.4□□□□□ -1.54
CFTRP13569 PRELID3BP8-201ENST00000604148 295 ntBASIC5.4□□□□□ -1.54
CFTRP13569 CYCSP41-201ENST00000616920 296 ntBASIC5.4□□□□□ -1.54
CFTRP13569 AL359757.2-201ENST00000624309 274 ntBASIC5.4□□□□□ -1.54
CFTRP13569 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CFTRP13569 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CFTRP13569 AC000403.1-201ENST00000613696 3585 ntBASIC5.4□□□□□ -1.55
CFTRP13569 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms