Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.2□□□□□ -1.9
TPRP12270 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.2□□□□□ -1.9
TPRP12270 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.2□□□□□ -1.9
TPRP12270 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
TPRP12270 SETP12-201ENST00000514068 805 ntBASIC3.2□□□□□ -1.9
TPRP12270 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.2□□□□□ -1.9
TPRP12270 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.2□□□□□ -1.9
TPRP12270 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.2□□□□□ -1.9
TPRP12270 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
TPRP12270 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TPRP12270 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPRP12270 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TPRP12270 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.2□□□□□ -1.9
TPRP12270 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.2□□□□□ -1.9
TPRP12270 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TPRP12270 AL645568.2-201ENST00000432815 1337 ntBASIC3.2□□□□□ -1.9
TPRP12270 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TPRP12270 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
TPRP12270 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TPRP12270 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 AL009174.1-201ENST00000426577 416 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC007563.3-201ENST00000433233 371 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 ANXA2P1-201ENST00000505539 926 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC026782.2-201ENST00000510845 636 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC234778.2-201ENST00000566241 354 ntBASIC3.19□□□□□ -1.9
TPRP12270 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.19□□□□□ -1.9
TPRP12270 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
TPRP12270 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
TPRP12270 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.19□□□□□ -1.9
TPRP12270 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TPRP12270 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.19□□□□□ -1.9
TPRP12270 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TPRP12270 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.19□□□□□ -1.9
TPRP12270 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 RNU6-482P-201ENST00000391068 107 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.19□□□□□ -1.9
TPRP12270 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.19□□□□□ -1.9
TPRP12270 SETP9-201ENST00000423837 832 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AC099563.1-201ENST00000456086 418 ntBASIC3.19□□□□□ -1.9
TPRP12270 RN7SL585P-201ENST00000470538 280 ntBASIC3.19□□□□□ -1.9
TPRP12270 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TPRP12270 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AC009812.2-201ENST00000517657 457 ntBASIC3.19□□□□□ -1.9
TPRP12270 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.19□□□□□ -1.9
TPRP12270 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.19□□□□□ -1.9
TPRP12270 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.19□□□□□ -1.9
TPRP12270 AL451142.2-201ENST00000429076 2090 ntBASIC3.19□□□□□ -1.9
TPRP12270 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.19□□□□□ -1.9
TPRP12270 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.18□□□□□ -1.9
TPRP12270 SDCBPP2-201ENST00000424643 885 ntBASIC3.18□□□□□ -1.9
TPRP12270 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
TPRP12270 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TPRP12270 AC100770.1-201ENST00000532310 322 ntBASIC3.18□□□□□ -1.9
TPRP12270 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.18□□□□□ -1.9
TPRP12270 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.18□□□□□ -1.9
TPRP12270 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.18□□□□□ -1.9
TPRP12270 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TPRP12270 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.18□□□□□ -1.9
TPRP12270 Y_RNA.4-201ENST00000362333 112 ntBASIC3.18□□□□□ -1.9
TPRP12270 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
TPRP12270 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.18□□□□□ -1.9
TPRP12270 AL031736.2-201ENST00000426573 787 ntBASIC3.18□□□□□ -1.9
TPRP12270 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.18□□□□□ -1.9
TPRP12270 ATP5C1P1-201ENST00000441945 895 ntBASIC3.18□□□□□ -1.9
TPRP12270 SETP4-201ENST00000455717 868 ntBASIC3.18□□□□□ -1.9
TPRP12270 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
TPRP12270 RNA5SP445-201ENST00000515889 115 ntBASIC3.18□□□□□ -1.9
TPRP12270 AL096803.3-201ENST00000609032 532 ntBASIC3.18□□□□□ -1.9
TPRP12270 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TPRP12270 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TPRP12270 Y_RNA.269-201ENST00000364685 89 ntBASIC3.17□□□□□ -1.9
TPRP12270 VN1R8P-201ENST00000407739 893 ntBASIC3.17□□□□□ -1.9
TPRP12270 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.17□□□□□ -1.9
TPRP12270 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.17□□□□□ -1.9
TPRP12270 UBE2V2P4-201ENST00000447495 259 ntBASIC3.17□□□□□ -1.9
TPRP12270 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
TPRP12270 DEFB109F-201ENST00000491870 277 ntBASIC3.17□□□□□ -1.9
TPRP12270 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.17□□□□□ -1.9
TPRP12270 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.17□□□□□ -1.9
TPRP12270 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.17□□□□□ -1.9
TPRP12270 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.17□□□□□ -1.9
TPRP12270 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.17□□□□□ -1.9
TPRP12270 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TPRP12270 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
TPRP12270 AC046144.1-201ENST00000478559 1853 ntBASIC3.17□□□□□ -1.9
TPRP12270 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
TPRP12270 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TPRP12270 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TPRP12270 AC090971.4-201ENST00000560291 1800 ntBASIC3.17□□□□□ -1.9
TPRP12270 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms