Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 AC007424.1-203ENST00000554613 687 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC105129.1-201ENST00000560250 297 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AC017100.2-201ENST00000584628 355 ntBASIC4.41□□□□□ -1.7
PCNAP12004 SLC25A36P1-201ENST00000590111 465 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC073091.2-201ENST00000603205 907 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.41□□□□□ -1.7
PCNAP12004 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AC123768.4-201ENST00000616244 701 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RMST_9.1-201ENST00000619945 193 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC131159.1-201ENST00000621854 213 ntBASIC4.41□□□□□ -1.7
PCNAP12004 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 AC091953.3-201ENST00000623220 236 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AP000676.3-201ENST00000623299 569 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC007490.1-201ENST00000624321 703 ntBASIC4.41□□□□□ -1.7
PCNAP12004 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.41□□□□□ -1.7
PCNAP12004 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 AC090229.1-201ENST00000590983 1609 ntBASIC4.41□□□□□ -1.7
PCNAP12004 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 AC007529.1-201ENST00000418574 2178 ntBASIC4.41□□□□□ -1.7
PCNAP12004 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCNAP12004 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
PCNAP12004 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCNAP12004 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCNAP12004 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.4□□□□□ -1.7
PCNAP12004 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PCNAP12004 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PCNAP12004 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.4□□□□□ -1.71
PCNAP12004 RNU6-1293P-201ENST00000384077 107 ntBASIC4.4□□□□□ -1.71
PCNAP12004 RNY3P9-201ENST00000384727 106 ntBASIC4.4□□□□□ -1.71
PCNAP12004 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
PCNAP12004 MIR921-201ENST00000401133 56 ntBASIC4.4□□□□□ -1.71
PCNAP12004 RN7SKP106-201ENST00000410832 272 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AL360081.1-201ENST00000428299 555 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 MTND5P25-201ENST00000430499 799 ntBASIC4.4□□□□□ -1.71
PCNAP12004 USP9YP31-201ENST00000431405 881 ntBASIC4.4□□□□□ -1.71
PCNAP12004 RPS6P15-201ENST00000431996 751 ntBASIC4.4□□□□□ -1.71
PCNAP12004 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 ART2BP-201ENST00000453501 499 ntBASIC4.4□□□□□ -1.71
PCNAP12004 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.4□□□□□ -1.71
PCNAP12004 RPL23AP2-201ENST00000471227 466 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC010683.1-201ENST00000473673 378 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 FTH1P24-201ENST00000503502 462 ntBASIC4.4□□□□□ -1.71
PCNAP12004 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC025674.1-201ENST00000507074 324 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC007016.1-201ENST00000512110 244 ntBASIC4.4□□□□□ -1.71
PCNAP12004 RN7SKP31-201ENST00000516354 278 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AP000619.3-201ENST00000535634 1127 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC135001.1-201ENST00000544546 283 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCNAP12004 SERPINE4P-201ENST00000554978 281 ntBASIC4.4□□□□□ -1.71
PCNAP12004 DUXAP1-201ENST00000556632 463 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC093765.1-201ENST00000603758 881 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AL133338.2-201ENST00000604292 736 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AL133507.1-201ENST00000605269 557 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.4□□□□□ -1.71
PCNAP12004 AL450489.1-201ENST00000612071 468 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AL139418.1-201ENST00000613613 177 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.4□□□□□ -1.71
PCNAP12004 AC069209.1-201ENST00000619282 651 ntBASIC4.4□□□□□ -1.71
PCNAP12004 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 RNU6-156P-201ENST00000621869 107 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AC073348.1-201ENST00000623002 331 ntBASIC4.4□□□□□ -1.71
PCNAP12004 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.4□□□□□ -1.71
PCNAP12004 AC068620.4-201ENST00000636730 1182 ntBASIC4.4□□□□□ -1.71
PCNAP12004 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCNAP12004 AP000776.1-201ENST00000530032 1663 ntBASIC4.4□□□□□ -1.71
PCNAP12004 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCNAP12004 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCNAP12004 KARSP3-201ENST00000571212 1504 ntBASIC4.4□□□□□ -1.71
PCNAP12004 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCNAP12004 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCNAP12004 AC006971.1-201ENST00000407916 4486 ntBASIC4.4□□□□□ -1.71
PCNAP12004 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCNAP12004 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.39□□□□□ -1.71
PCNAP12004 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms