Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FREM3P0C091 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FREM3P0C091 OR52B1P-201ENST00000316506 909 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.01□□□□□ -1.93
FREM3P0C091 PPIAP17-201ENST00000438507 471 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.01□□□□□ -1.93
FREM3P0C091 SCARNA13-201ENST00000516672 275 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.01□□□□□ -1.93
FREM3P0C091 AC092851.1-201ENST00000535964 478 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.01□□□□□ -1.93
FREM3P0C091 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.01□□□□□ -1.93
FREM3P0C091 AC037471.2-201ENST00000564941 598 ntBASIC3.01□□□□□ -1.93
FREM3P0C091 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.01□□□□□ -1.93
FREM3P0C091 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.01□□□□□ -1.93
FREM3P0C091 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
FREM3P0C091 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 MIR483-201ENST00000385070 76 ntBASIC3□□□□□ -1.93
FREM3P0C091 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
FREM3P0C091 RN7SKP111-201ENST00000410349 271 ntBASIC3□□□□□ -1.93
FREM3P0C091 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3□□□□□ -1.93
FREM3P0C091 AP000936.3-201ENST00000438127 255 ntBASIC3□□□□□ -1.93
FREM3P0C091 ATP5C1P1-201ENST00000441945 895 ntBASIC3□□□□□ -1.93
FREM3P0C091 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
FREM3P0C091 S100A11P2-201ENST00000467589 312 ntBASIC3□□□□□ -1.93
FREM3P0C091 RN7SL594P-201ENST00000470590 287 ntBASIC3□□□□□ -1.93
FREM3P0C091 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3□□□□□ -1.93
FREM3P0C091 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3□□□□□ -1.93
FREM3P0C091 KCTD9P6-201ENST00000522306 950 ntBASIC3□□□□□ -1.93
FREM3P0C091 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3□□□□□ -1.93
FREM3P0C091 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3□□□□□ -1.93
FREM3P0C091 CSNK1A1P1-202ENST00000563423 981 ntBASIC3□□□□□ -1.93
FREM3P0C091 BNIP3P11-201ENST00000603878 563 ntBASIC3□□□□□ -1.93
FREM3P0C091 RMST_8.1-201ENST00000610287 165 ntBASIC3□□□□□ -1.93
FREM3P0C091 RNVU1-4-201ENST00000612985 164 ntBASIC3□□□□□ -1.93
FREM3P0C091 ATP5A1P2-202ENST00000616464 443 ntBASIC3□□□□□ -1.93
FREM3P0C091 U7.8-201ENST00000619968 63 ntBASIC3□□□□□ -1.93
FREM3P0C091 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
FREM3P0C091 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3□□□□□ -1.93
FREM3P0C091 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3□□□□□ -1.93
FREM3P0C091 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
FREM3P0C091 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.99□□□□□ -1.93
FREM3P0C091 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FREM3P0C091 AC104297.1-201ENST00000393779 870 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AL512430.2-201ENST00000406786 339 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AC073136.2-201ENST00000417282 849 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 RPF2P1-201ENST00000424137 906 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AC011242.1-201ENST00000433596 1158 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 MTND4LP12-201ENST00000448237 295 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FREM3P0C091 RN7SL601P-201ENST00000471221 293 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.99□□□□□ -1.93
FREM3P0C091 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.99□□□□□ -1.93
FREM3P0C091 AC023141.12-201ENST00000512399 199 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.99□□□□□ -1.93
FREM3P0C091 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.99□□□□□ -1.93
FREM3P0C091 CD24P2-201ENST00000565486 219 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.99□□□□□ -1.93
FREM3P0C091 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.99□□□□□ -1.93
FREM3P0C091 AC131238.1-201ENST00000617135 328 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.99□□□□□ -1.93
FREM3P0C091 AL445437.1-201ENST00000623157 3087 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 CR383658.2-201ENST00000547576 1525 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
FREM3P0C091 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.99□□□□□ -1.93
FREM3P0C091 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FREM3P0C091 AC097713.2-201ENST00000430199 356 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.99□□□□□ -1.93
FREM3P0C091 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.99□□□□□ -1.93
FREM3P0C091 AC023598.1-201ENST00000472521 361 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 SNORA70.24-201ENST00000517233 118 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AL442067.2-201ENST00000614033 363 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 AP001002.2-201ENST00000625137 386 ntBASIC2.99□□□□□ -1.93
FREM3P0C091 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
FREM3P0C091 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
FREM3P0C091 AC007390.2-201ENST00000606229 3803 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.98□□□□□ -1.93
FREM3P0C091 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
FREM3P0C091 SNORA48.2-201ENST00000390926 124 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.98□□□□□ -1.93
FREM3P0C091 RPS12P23-201ENST00000419579 400 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.98□□□□□ -1.93
FREM3P0C091 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.98□□□□□ -1.93
FREM3P0C091 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.98□□□□□ -1.93
FREM3P0C091 AC098583.1-201ENST00000480875 255 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 HMGB3P14-201ENST00000494195 599 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 RNA5SP217-201ENST00000515959 91 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.98□□□□□ -1.93
FREM3P0C091 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.98□□□□□ -1.93
FREM3P0C091 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.98□□□□□ -1.93
FREM3P0C091 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.98□□□□□ -1.93
FREM3P0C091 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.98□□□□□ -1.93
FREM3P0C091 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.98□□□□□ -1.93
FREM3P0C091 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
FREM3P0C091 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms