Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB2P05538 CR383658.2-201ENST00000547576 1525 ntBASIC3.4□□□□□ -1.86
HLA-DQB2P05538 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.4□□□□□ -1.86
HLA-DQB2P05538 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB2P05538 AL592437.2-201ENST00000421655 2434 ntBASIC3.4□□□□□ -1.86
HLA-DQB2P05538 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 SNORA62.2-201ENST00000364672 152 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RNU6-146P-201ENST00000384602 108 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RNU2-65P-201ENST00000410162 185 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AL159987.2-201ENST00000432754 307 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC239367.2-201ENST00000447309 705 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 CALM1P2-201ENST00000452941 448 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 EIF2S2P4-201ENST00000461070 984 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC004801.2-202ENST00000463559 283 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 TRBV8-2-201ENST00000475637 270 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RPL21P13-201ENST00000488305 481 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 HMGB1P21-201ENST00000502313 581 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RNU6-347P-201ENST00000516658 105 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC068714.1-201ENST00000559623 800 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 VN1R79P-201ENST00000593540 513 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AL354950.1-201ENST00000614150 568 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC007342.7-201ENST00000624610 2337 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 AC095050.2-201ENST00000510748 1458 ntBASIC3.4□□□□□ -1.87
HLA-DQB2P05538 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQB2P05538 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 RNA5SP119-201ENST00000362715 117 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL034403.1-201ENST00000399414 885 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 BX679664.1-201ENST00000434429 253 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 RPL21P71-201ENST00000465598 459 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 METTL15P1-201ENST00000481421 1045 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 RPL7P38-201ENST00000488396 739 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 RN7SKP116-201ENST00000516902 319 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AC092868.3-201ENST00000560515 784 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 MIR4276-201ENST00000584832 70 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AC019131.2-201ENST00000609071 870 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 AC009950.2-201ENST00000636548 183 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 U6.105-201ENST00000637379 88 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 OR8B1P-202ENST00000641132 1178 ntBASIC3.39□□□□□ -1.87
HLA-DQB2P05538 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DQB2P05538 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RNU1-33P-201ENST00000364249 162 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 MIR183-201ENST00000384958 110 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RN7SKP27-201ENST00000410684 333 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RPS3AP25-201ENST00000411660 793 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 AC093578.1-201ENST00000415219 368 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RPL7P53-201ENST00000421245 739 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 AC044797.1-201ENST00000445744 679 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 CYCSP35-201ENST00000451978 304 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 NIPA2P2-201ENST00000496376 1083 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 APOOP4-201ENST00000513530 597 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 AC084757.1-201ENST00000559987 490 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 MIR4444-1-201ENST00000581696 74 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 MIR4444-2-201ENST00000584390 74 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 AC015967.1-201ENST00000619893 476 ntBASIC3.38□□□□□ -1.87
HLA-DQB2P05538 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms