Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL022161.1-201ENST00000604390 213 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC120053.1-201ENST00000607706 736 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.25□□□□□ -1.73
COL2A1P02458 AC016590.3-201ENST00000611171 753 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 MIR8058-201ENST00000615737 89 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC079298.2-201ENST00000623885 459 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.25□□□□□ -1.73
COL2A1P02458 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL2A1P02458 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL2A1P02458 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 BTBD10P1-201ENST00000549824 1352 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
COL2A1P02458 AC118273.1-201ENST00000525324 3006 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.24□□□□□ -1.73
COL2A1P02458 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL2A1P02458 RNA5SP432-201ENST00000362480 116 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL2A1P02458 HSFY4P-201ENST00000415994 1181 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 MTCO1P45-201ENST00000431457 267 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 NDUFB1P1-201ENST00000435191 180 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.24□□□□□ -1.73
COL2A1P02458 CLIC4P1-201ENST00000453177 535 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC069277.2-201ENST00000454211 432 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC112198.4-201ENST00000515450 351 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC092747.2-201ENST00000545069 983 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.24□□□□□ -1.73
COL2A1P02458 YPEL5P2-201ENST00000605553 359 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC018690.1-201ENST00000608144 626 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 CR589904.2-201ENST00000612533 440 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AP003355.3-201ENST00000623465 114 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
COL2A1P02458 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC015813.6-201ENST00000624409 5808 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL2A1P02458 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.24□□□□□ -1.73
COL2A1P02458 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
COL2A1P02458 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 RNA5SP50-201ENST00000363731 107 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 SNORD116-2-201ENST00000384274 95 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 SNORD116-6-201ENST00000384711 96 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 CCNB2P1-201ENST00000399411 1150 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 MTCYBP7-201ENST00000419540 1134 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.24□□□□□ -1.73
COL2A1P02458 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.24□□□□□ -1.73
COL2A1P02458 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 RN7SL807P-201ENST00000470923 297 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 RPL32P34-201ENST00000486380 400 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 UBA52P3-201ENST00000491303 382 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 NAMPTP2-201ENST00000505629 1115 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC117522.2-201ENST00000510049 657 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC005351.1-201ENST00000511152 786 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 MTND2P32-201ENST00000521584 1038 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 DUXAP5-201ENST00000529668 529 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 EIF4BP1-201ENST00000554881 351 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC133794.1-201ENST00000602731 914 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC013444.2-201ENST00000603317 787 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COL2A1P02458 Z99289.3-201ENST00000605586 594 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC135507.2-201ENST00000612443 309 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 AC079395.3-201ENST00000615161 484 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC068787.1-201ENST00000623908 691 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.24□□□□□ -1.73
COL2A1P02458 AC004808.1-201ENST00000627671 721 ntBASIC4.24□□□□□ -1.73
COL2A1P02458 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL2A1P02458 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 LINC02471-203ENST00000641941 4752 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
COL2A1P02458 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL2A1P02458 RNU4-35P-201ENST00000362588 141 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 AJ239321.1-201ENST00000424255 564 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AL512661.1-201ENST00000434586 1253 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 USP9YP28-201ENST00000435142 589 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC073587.1-201ENST00000447093 876 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms