Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 CDRT1-208ENST00000630868 794 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SEMA3DO95025 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SEMA3DO95025 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 AC005183.1-201ENST00000603687 1979 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 RNU6-666P-201ENST00000363499 107 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 RN7SKP227-201ENST00000364445 330 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AL512504.1-201ENST00000415494 778 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 HMGB3P20-201ENST00000417997 600 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 MOB1AP1-201ENST00000430903 535 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AC022034.3-201ENST00000471393 478 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 RN7SL132P-201ENST00000478131 296 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AC005921.1-201ENST00000510589 286 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 OR7E13P-201ENST00000526052 910 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.55□□□□□ -1.84
SEMA3DO95025 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 MIR5187-201ENST00000583479 76 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AC022916.3-201ENST00000592961 742 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 KLKP1-201ENST00000595979 403 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 MIMT1-201ENST00000597105 1050 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AP004372.1-201ENST00000604842 844 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.55□□□□□ -1.84
SEMA3DO95025 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 AP000553.6-201ENST00000641242 118 ntBASIC3.55□□□□□ -1.84
SEMA3DO95025 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SEMA3DO95025 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
SEMA3DO95025 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEMA3DO95025 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SEMA3DO95025 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.54□□□□□ -1.84
SEMA3DO95025 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEMA3DO95025 MIR30B-201ENST00000384850 88 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 TCEA1P4-201ENST00000415066 844 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.54□□□□□ -1.84
SEMA3DO95025 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.54□□□□□ -1.84
SEMA3DO95025 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.54□□□□□ -1.84
SEMA3DO95025 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.54□□□□□ -1.84
SEMA3DO95025 UBDP1-202ENST00000457888 382 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.54□□□□□ -1.84
SEMA3DO95025 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AL035404.1-201ENST00000497982 568 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.54□□□□□ -1.84
SEMA3DO95025 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.54□□□□□ -1.84
SEMA3DO95025 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.54□□□□□ -1.84
SEMA3DO95025 CYP2C60P-201ENST00000566088 139 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 MIR3160-1-201ENST00000577972 85 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SEMA3DO95025 AC012557.1-201ENST00000607115 611 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AC006946.3-201ENST00000609791 756 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
SEMA3DO95025 MIR6810-201ENST00000622701 70 ntBASIC3.54□□□□□ -1.84
SEMA3DO95025 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SEMA3DO95025 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SEMA3DO95025 AL359715.4-201ENST00000606629 1436 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC026951.1-201ENST00000559530 2459 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SEMA3DO95025 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 SNORA31-201ENST00000362607 130 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 RNA5SP189-201ENST00000364920 115 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SEMA3DO95025 SOD2P1-201ENST00000396543 562 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
SEMA3DO95025 AL590704.1-201ENST00000402856 794 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.53□□□□□ -1.84
SEMA3DO95025 MTCYBP12-201ENST00000440559 1134 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 HMGN2P21-201ENST00000447764 270 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.53□□□□□ -1.84
SEMA3DO95025 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SEMA3DO95025 RNU7-27P-201ENST00000459281 62 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms