Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
CTNSO60931 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTNSO60931 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTNSO60931 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
CTNSO60931 RNU6-317P-201ENST00000384031 107 ntBASIC3.47□□□□□ -1.85
CTNSO60931 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 ATP5F1P4-201ENST00000397288 746 ntBASIC3.47□□□□□ -1.85
CTNSO60931 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNSO60931 AL160175.1-201ENST00000428124 247 ntBASIC3.47□□□□□ -1.85
CTNSO60931 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNSO60931 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNSO60931 MTCO3P20-201ENST00000454926 688 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AC099563.1-201ENST00000456086 418 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 FTH1P2-201ENST00000466086 412 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AC092451.1-201ENST00000480211 153 ntBASIC3.47□□□□□ -1.85
CTNSO60931 HMGB1P3-201ENST00000502802 616 ntBASIC3.47□□□□□ -1.85
CTNSO60931 HMGN1P11-201ENST00000508668 303 ntBASIC3.47□□□□□ -1.85
CTNSO60931 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNSO60931 MTND5P21-201ENST00000531961 522 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
CTNSO60931 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNSO60931 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNSO60931 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNSO60931 Z82195.1-201ENST00000604558 398 ntBASIC3.47□□□□□ -1.85
CTNSO60931 LINC00216-201ENST00000623548 1126 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 AP000553.6-201ENST00000641242 118 ntBASIC3.47□□□□□ -1.85
CTNSO60931 MTCO1P8-201ENST00000416914 1523 ntBASIC3.47□□□□□ -1.85
CTNSO60931 RNF6P1-201ENST00000444889 1784 ntBASIC3.47□□□□□ -1.85
CTNSO60931 AC006504.1-201ENST00000562493 3666 ntBASIC3.47□□□□□ -1.85
CTNSO60931 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNSO60931 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNSO60931 SEPT7P7-201ENST00000420492 1301 ntBASIC3.46□□□□□ -1.85
CTNSO60931 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CTNSO60931 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CTNSO60931 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNSO60931 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNSO60931 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNSO60931 AP001148.1-201ENST00000624124 2359 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CTNSO60931 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNSO60931 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 MIR554-201ENST00000384874 96 ntBASIC3.46□□□□□ -1.86
CTNSO60931 MIR134-201ENST00000385258 73 ntBASIC3.46□□□□□ -1.86
CTNSO60931 RPL7P60-201ENST00000397636 735 ntBASIC3.46□□□□□ -1.86
CTNSO60931 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNSO60931 MTHFD2P2-201ENST00000407725 247 ntBASIC3.46□□□□□ -1.86
CTNSO60931 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CTNSO60931 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNSO60931 AL445528.1-201ENST00000426330 420 ntBASIC3.46□□□□□ -1.86
CTNSO60931 USP9YP31-201ENST00000431405 881 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AL445584.1-201ENST00000431451 330 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AL035246.1-201ENST00000433554 1255 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AL138799.3-201ENST00000438968 350 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.46□□□□□ -1.86
CTNSO60931 CDC27P1-201ENST00000445384 715 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNSO60931 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.46□□□□□ -1.86
CTNSO60931 HMGB3P30-201ENST00000457863 606 ntBASIC3.46□□□□□ -1.86
CTNSO60931 SNRPGP3-201ENST00000469405 227 ntBASIC3.46□□□□□ -1.86
CTNSO60931 ACTR3P3-201ENST00000480448 893 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AC090543.1-201ENST00000492168 485 ntBASIC3.46□□□□□ -1.86
CTNSO60931 MTCO1P30-201ENST00000515244 580 ntBASIC3.46□□□□□ -1.86
CTNSO60931 PAICSP4-201ENST00000517543 1253 ntBASIC3.46□□□□□ -1.86
CTNSO60931 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNSO60931 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.46□□□□□ -1.86
CTNSO60931 MIR3186-201ENST00000577404 85 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNSO60931 AC005972.3-201ENST00000606304 481 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AL121772.2-201ENST00000614331 297 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AL356863.1-201ENST00000623378 1080 ntBASIC3.46□□□□□ -1.86
CTNSO60931 CR392039.4-201ENST00000624968 501 ntBASIC3.46□□□□□ -1.86
CTNSO60931 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
CTNSO60931 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNSO60931 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNSO60931 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTNSO60931 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTNSO60931 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
CTNSO60931 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
CTNSO60931 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTNSO60931 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTNSO60931 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.45□□□□□ -1.86
CTNSO60931 RNU6-452P-201ENST00000384406 107 ntBASIC3.45□□□□□ -1.86
CTNSO60931 AC069218.2-201ENST00000411665 344 ntBASIC3.45□□□□□ -1.86
CTNSO60931 HMGB3P20-201ENST00000417997 600 ntBASIC3.45□□□□□ -1.86
CTNSO60931 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
CTNSO60931 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
CTNSO60931 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.45□□□□□ -1.86
CTNSO60931 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.45□□□□□ -1.86
CTNSO60931 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.45□□□□□ -1.86
CTNSO60931 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.45□□□□□ -1.86
CTNSO60931 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.45□□□□□ -1.86
CTNSO60931 AC122718.1-201ENST00000439448 744 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms