Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.41□□□□□ -1.7
LDB2O43679 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.41□□□□□ -1.7
LDB2O43679 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.41□□□□□ -1.7
LDB2O43679 AC079171.1-201ENST00000568788 914 ntBASIC4.41□□□□□ -1.7
LDB2O43679 AC135628.1-201ENST00000568867 534 ntBASIC4.41□□□□□ -1.7
LDB2O43679 VN1R82P-201ENST00000601481 356 ntBASIC4.41□□□□□ -1.7
LDB2O43679 AC146944.4-201ENST00000602697 718 ntBASIC4.41□□□□□ -1.7
LDB2O43679 AC012557.2-201ENST00000605919 418 ntBASIC4.41□□□□□ -1.7
LDB2O43679 AC092140.2-201ENST00000618027 521 ntBASIC4.41□□□□□ -1.7
LDB2O43679 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LDB2O43679 ATE1-AS1-202ENST00000636460 506 ntBASIC4.41□□□□□ -1.7
LDB2O43679 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.41□□□□□ -1.7
LDB2O43679 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LDB2O43679 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LDB2O43679 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LDB2O43679 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.41□□□□□ -1.7
LDB2O43679 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDB2O43679 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LDB2O43679 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDB2O43679 AC096656.1-201ENST00000623826 1364 ntBASIC4.4□□□□□ -1.7
LDB2O43679 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LDB2O43679 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LDB2O43679 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LDB2O43679 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.4□□□□□ -1.7
LDB2O43679 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.7
LDB2O43679 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LDB2O43679 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDB2O43679 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LDB2O43679 SNORD116-9-201ENST00000384000 95 ntBASIC4.4□□□□□ -1.71
LDB2O43679 SNORD116-3-201ENST00000384287 95 ntBASIC4.4□□□□□ -1.71
LDB2O43679 SNORD116-7-201ENST00000384404 95 ntBASIC4.4□□□□□ -1.71
LDB2O43679 SNORD116-5-201ENST00000384462 95 ntBASIC4.4□□□□□ -1.71
LDB2O43679 U3.22-201ENST00000391120 215 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AL590084.2-201ENST00000401481 382 ntBASIC4.4□□□□□ -1.71
LDB2O43679 GSTA8P-201ENST00000404253 637 ntBASIC4.4□□□□□ -1.71
LDB2O43679 RNA5SP80-201ENST00000410475 111 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.4□□□□□ -1.71
LDB2O43679 RPL21P108-201ENST00000413857 481 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC048351.1-201ENST00000420064 602 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AL356387.2-201ENST00000422272 243 ntBASIC4.4□□□□□ -1.71
LDB2O43679 RPL7P44-201ENST00000424827 742 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC073069.1-201ENST00000428657 441 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 AL031663.1-201ENST00000437445 219 ntBASIC4.4□□□□□ -1.71
LDB2O43679 GSTA7P-201ENST00000438425 448 ntBASIC4.4□□□□□ -1.71
LDB2O43679 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 RFC5P1-201ENST00000454419 874 ntBASIC4.4□□□□□ -1.71
LDB2O43679 PNPLA4P1-201ENST00000458328 305 ntBASIC4.4□□□□□ -1.71
LDB2O43679 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LDB2O43679 RPL23AP71-201ENST00000470966 469 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 AC111000.2-201ENST00000507775 550 ntBASIC4.4□□□□□ -1.71
LDB2O43679 MTCYBP16-201ENST00000509187 1129 ntBASIC4.4□□□□□ -1.71
LDB2O43679 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LDB2O43679 AC079395.1-201ENST00000510981 262 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC109445.1-201ENST00000512356 383 ntBASIC4.4□□□□□ -1.71
LDB2O43679 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.4□□□□□ -1.71
LDB2O43679 IGKV2-36-201ENST00000519999 223 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC087808.1-201ENST00000520501 361 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 AC005832.3-201ENST00000537929 631 ntBASIC4.4□□□□□ -1.71
LDB2O43679 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.4□□□□□ -1.71
LDB2O43679 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LDB2O43679 HIGD1AP17-201ENST00000554576 276 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC090616.2-202ENST00000584248 222 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.4□□□□□ -1.71
LDB2O43679 NTAN1P1-201ENST00000603150 646 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.4□□□□□ -1.71
LDB2O43679 AC009220.3-201ENST00000604318 586 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC105129.3-201ENST00000605455 485 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC011939.3-201ENST00000613686 466 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AC010608.2-201ENST00000624830 470 ntBASIC4.4□□□□□ -1.71
LDB2O43679 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.4□□□□□ -1.71
LDB2O43679 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LDB2O43679 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LDB2O43679 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDB2O43679 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 ELL2P3-201ENST00000457883 1602 ntBASIC4.39□□□□□ -1.71
LDB2O43679 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
LDB2O43679 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 AC005539.1-201ENST00000443768 1479 ntBASIC4.39□□□□□ -1.71
LDB2O43679 Z99496.1-201ENST00000469424 1477 ntBASIC4.39□□□□□ -1.71
LDB2O43679 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.39□□□□□ -1.71
LDB2O43679 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
LDB2O43679 Y_RNA.318-201ENST00000365131 97 ntBASIC4.39□□□□□ -1.71
LDB2O43679 SNORA51.12-201ENST00000384448 134 ntBASIC4.39□□□□□ -1.71
LDB2O43679 TMSB4XP8-201ENST00000402089 135 ntBASIC4.39□□□□□ -1.71
LDB2O43679 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.39□□□□□ -1.71
LDB2O43679 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 TMSB4XP6-201ENST00000415187 135 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 AC016907.1-201ENST00000419483 435 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms