Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 AL672167.1-204ENST00000641875 3017 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AL034370.1-201ENST00000397254 1590 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC021242.1-201ENST00000507315 2035 ntBASIC4.82□□□□□ -1.64
PROM1O43490 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PROM1O43490 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.82□□□□□ -1.64
PROM1O43490 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PROM1O43490 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PROM1O43490 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PROM1O43490 RPL21P132-201ENST00000331267 462 ntBASIC4.82□□□□□ -1.64
PROM1O43490 RNA5SP305-201ENST00000362665 119 ntBASIC4.82□□□□□ -1.64
PROM1O43490 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
PROM1O43490 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.82□□□□□ -1.64
PROM1O43490 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.82□□□□□ -1.64
PROM1O43490 RN7SKP114-201ENST00000410327 279 ntBASIC4.82□□□□□ -1.64
PROM1O43490 RNU2-66P-201ENST00000410650 161 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.82□□□□□ -1.64
PROM1O43490 AC092647.1-201ENST00000420654 287 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.82□□□□□ -1.64
PROM1O43490 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.82□□□□□ -1.64
PROM1O43490 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AL139415.2-201ENST00000431968 163 ntBASIC4.82□□□□□ -1.64
PROM1O43490 LARP1BP3-201ENST00000437229 869 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC006466.1-201ENST00000438721 289 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AC004980.3-201ENST00000447046 365 ntBASIC4.82□□□□□ -1.64
PROM1O43490 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.82□□□□□ -1.64
PROM1O43490 SSXP1-201ENST00000453640 473 ntBASIC4.82□□□□□ -1.64
PROM1O43490 HIGD1AP8-201ENST00000453927 274 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AL591473.1-201ENST00000464297 313 ntBASIC4.82□□□□□ -1.64
PROM1O43490 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 AC097484.1-201ENST00000471148 389 ntBASIC4.82□□□□□ -1.64
PROM1O43490 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PROM1O43490 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 RN7SL441P-201ENST00000492388 296 ntBASIC4.82□□□□□ -1.64
PROM1O43490 RN7SL591P-201ENST00000496150 292 ntBASIC4.82□□□□□ -1.64
PROM1O43490 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PROM1O43490 ARL2BPP4-201ENST00000506854 471 ntBASIC4.82□□□□□ -1.64
PROM1O43490 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 MTCYBP43-201ENST00000513621 740 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC116347.2-201ENST00000514912 523 ntBASIC4.82□□□□□ -1.64
PROM1O43490 FABP5P5-201ENST00000515537 406 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC074029.1-201ENST00000552531 1044 ntBASIC4.82□□□□□ -1.64
PROM1O43490 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC011447.4-201ENST00000587562 111 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC024560.3-201ENST00000608482 349 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
PROM1O43490 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.82□□□□□ -1.64
PROM1O43490 AC073869.10-201ENST00000642016 354 ntBASIC4.82□□□□□ -1.64
PROM1O43490 AL079343.1-201ENST00000572358 1771 ntBASIC4.82□□□□□ -1.64
PROM1O43490 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PROM1O43490 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.82□□□□□ -1.64
PROM1O43490 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.82□□□□□ -1.64
PROM1O43490 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.82□□□□□ -1.64
PROM1O43490 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
PROM1O43490 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
PROM1O43490 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 FGF7P2-201ENST00000332473 296 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RNU6-582P-201ENST00000362989 107 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RNU4-91P-201ENST00000364778 135 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC007066.1-201ENST00000392902 381 ntBASIC4.81□□□□□ -1.64
PROM1O43490 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 U3.32-201ENST00000408116 212 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RN7SKP33-201ENST00000410942 340 ntBASIC4.81□□□□□ -1.64
PROM1O43490 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.81□□□□□ -1.64
PROM1O43490 ATG4AP1-201ENST00000416893 538 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 AC241584.1-201ENST00000438469 1241 ntBASIC4.81□□□□□ -1.64
PROM1O43490 UBE2V1P3-201ENST00000439651 417 ntBASIC4.81□□□□□ -1.64
PROM1O43490 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 MTATP6P23-201ENST00000440153 476 ntBASIC4.81□□□□□ -1.64
PROM1O43490 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 YWHAQP9-201ENST00000445891 512 ntBASIC4.81□□□□□ -1.64
PROM1O43490 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 IFNWP4-201ENST00000453148 294 ntBASIC4.81□□□□□ -1.64
PROM1O43490 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 AC091180.1-201ENST00000462104 372 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms