Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 RNU6-444P-201ENST00000383988 108 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL161909.1-201ENST00000397390 712 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 MTCO1P56-201ENST00000401674 224 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 HDGFP1-201ENST00000405943 252 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL450992.3-201ENST00000413192 568 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 MTND2P9-201ENST00000422293 931 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 RPP40P1-201ENST00000426762 456 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC073335.1-201ENST00000427776 363 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC008065.1-201ENST00000428525 348 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 Z99714.1-201ENST00000450463 807 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC005008.1-201ENST00000456151 612 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 GAPDHP39-201ENST00000481866 979 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC093824.1-201ENST00000508796 343 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP49-201ENST00000516450 115 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AP001207.2-201ENST00000519490 539 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC090281.1-201ENST00000523019 276 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL352979.3-201ENST00000553515 247 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 MTCYBP23-201ENST00000558717 1102 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC022069.1-201ENST00000582910 658 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL354984.3-201ENST00000604803 325 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC026979.4-201ENST00000606555 645 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 PART1_2.1-201ENST00000612397 250 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AL021997.2-201ENST00000615674 271 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC109454.4-201ENST00000623411 649 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC124312.6-202ENST00000623624 418 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC090506.2-201ENST00000624521 419 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 FP325313.1-201ENST00000638228 703 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA3F8WFD2 AC000367.1-201ENST00000452711 1766 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AL583835.1-201ENST00000399570 407 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC097374.1-203ENST00000400783 485 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP317-201ENST00000410176 116 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP36-201ENST00000410197 133 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNU6-628P-201ENST00000410675 107 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 MIR1911-201ENST00000410783 80 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP311-201ENST00000411290 116 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 PDSS1P1-201ENST00000422953 1114 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 MTCO2P23-201ENST00000425216 680 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 OR4F13P-201ENST00000428478 931 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 KCTD10P1-201ENST00000434203 625 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 OR4C10P-201ENST00000434991 931 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AL512326.1-201ENST00000443050 721 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 NF1P3-201ENST00000457709 450 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RN7SL817P-201ENST00000480777 288 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 DYNLL1P6-201ENST00000503440 264 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 UBE2V1P12-201ENST00000503954 474 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP315-201ENST00000516340 116 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP519-201ENST00000516480 119 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP312-201ENST00000517068 116 ntBASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA3F8WFD2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms