Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC090897.3-201ENST00000636973 1157 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC111188.2-201ENST00000529697 1387 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AL121657.1-201ENST00000327215 531 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RNU4-40P-201ENST00000364351 143 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RNU6-224P-201ENST00000384055 107 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 MTCO2P31-201ENST00000402702 684 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RN7SKP182-201ENST00000410772 298 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC105402.1-201ENST00000413336 545 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC073335.1-201ENST00000427776 363 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RPS24P8-201ENST00000431490 402 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 BTF3P10-201ENST00000433415 495 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RPL7P48-201ENST00000461513 746 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 RPS29P19-201ENST00000479709 171 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC011037.1-201ENST00000483964 558 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC025260.1-201ENST00000548858 430 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC023824.3-201ENST00000569003 562 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC015688.2-201ENST00000584523 262 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 VN1R84P-201ENST00000593697 235 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC068790.5-201ENST00000602741 355 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 MTND3P19-201ENST00000603825 345 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC023043.4-201ENST00000612081 449 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 MIR7973-1-201ENST00000614683 76 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 MIR8059-201ENST00000620427 81 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC138907.10-201ENST00000623708 983 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AC116563.2-201ENST00000624751 535 ntBASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX9Q9Y5X1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 SEC63P2-201ENST00000503863 1939 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC067945.1-201ENST00000342609 618 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 RNU6-98P-201ENST00000384173 107 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 SNORA70C-201ENST00000384538 135 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 TAF13P2-201ENST00000416876 286 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 RBMY1KP-201ENST00000423480 476 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 SETP8-201ENST00000435341 628 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC092170.1-201ENST00000440211 356 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC006511.1-201ENST00000470614 315 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC093267.1-201ENST00000489176 961 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AP000563.1-201ENST00000490865 758 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC023050.1-201ENST00000498198 304 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC091860.1-201ENST00000505723 432 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 IGBP1P5-201ENST00000507524 1000 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 OR4A2P-201ENST00000527276 913 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC025884.1-201ENST00000556034 378 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC005412.1-201ENST00000580812 1049 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 MIR548Y-201ENST00000582739 110 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AC007390.2-201ENST00000606229 3803 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AL355816.1-201ENST00000607951 118 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 STMN1P1-201ENST00000617809 440 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 AL731566.2-201ENST00000618971 317 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 VN1R7P-201ENST00000619242 903 ntBASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX9Q9Y5X1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX9Q9Y5X1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms