Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU4-47P-201ENST00000410876 114 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC006028.1-201ENST00000438379 402 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 RPL7P59-201ENST00000447700 943 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 MTND2P25-201ENST00000449028 610 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 OR2A20P-203ENST00000498397 1268 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC018442.3-201ENST00000523025 183 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC004024.1-201ENST00000549244 247 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AL121576.1-201ENST00000556055 276 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC104763.2-201ENST00000604179 382 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 OR2AS2P-201ENST00000606902 342 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 AL513302.2-201ENST00000562313 1842 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 CR383658.2-201ENST00000547576 1525 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 AC005332.5-201ENST00000591222 2919 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 SNORA54-201ENST00000384281 123 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 ACTG1P13-201ENST00000486987 1043 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 AC106785.3-201ENST00000564064 847 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 MIR3162-201ENST00000581818 82 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 AC006946.3-201ENST00000609791 756 ntBASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.99□□□□□ -1.61
SHANK2Q9UPX8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 HMGN1P24-201ENST00000412282 298 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AL357552.1-201ENST00000445254 415 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC021678.1-201ENST00000505195 936 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC138932.5-201ENST00000617759 563 ntBASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHANK2Q9UPX8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC097634.1-201ENST00000604491 2467 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 MIR422A-201ENST00000362286 90 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 RNA5SP235-201ENST00000365411 114 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 RNU1-89P-201ENST00000384592 164 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC005002.1-201ENST00000447458 540 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 RPL7P48-201ENST00000461513 746 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 RN7SL863P-201ENST00000462370 296 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC021205.2-201ENST00000480069 347 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 AL157817.1-201ENST00000614264 790 ntBASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHANK2Q9UPX8 CEP170P1-201ENST00000502249 4587 ntBASIC4.96□□□□□ -1.61
SHANK2Q9UPX8 AC073073.2-201ENST00000609827 2578 ntBASIC4.96□□□□□ -1.61
SHANK2Q9UPX8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
SHANK2Q9UPX8 AC012065.2-201ENST00000421295 375 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 HMGB3P9-201ENST00000441799 583 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 CCDC75P1-201ENST00000469247 791 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 FCF1P3-201ENST00000496394 590 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 snoU109.6-201ENST00000516831 118 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 HIGD1AP1-201ENST00000550979 275 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 IGHV3-29-201ENST00000604817 344 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 AC087190.4-201ENST00000574616 8334 ntBASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK2Q9UPX8 HSPA8P17-201ENST00000427029 1382 ntBASIC4.95□□□□□ -1.62
SHANK2Q9UPX8 AC017071.1-201ENST00000564407 2204 ntBASIC4.95□□□□□ -1.62
SHANK2Q9UPX8 SNORA7.4-201ENST00000384249 137 ntBASIC4.95□□□□□ -1.62
SHANK2Q9UPX8 RNU6-729P-201ENST00000384399 107 ntBASIC4.95□□□□□ -1.62
SHANK2Q9UPX8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms