Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 MRPL42P6-201ENST00000486397 371 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC105758.1-201ENST00000506038 399 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AP000648.1-201ENST00000529682 397 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC036111.2-201ENST00000533247 901 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 NPM1P42-201ENST00000560329 862 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC005332.4-201ENST00000592752 579 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC068790.3-201ENST00000602988 553 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AL359091.2-201ENST00000609303 556 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 MAPK10-287ENST00000641217 3037 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC007406.5-201ENST00000570140 3170 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.8-201ENST00000362353 102 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-666P-201ENST00000363499 107 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.237-201ENST00000364439 102 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-417P-201ENST00000384712 107 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 MT-TP-201ENST00000387461 68 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RNU2-33P-201ENST00000410344 192 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 GAPDHP59-201ENST00000435908 267 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RPL21P133-201ENST00000443666 476 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RPS23P9-201ENST00000448848 438 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC008716.1-201ENST00000511084 513 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-861P-201ENST00000516745 106 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC073581.1-201ENST00000519036 575 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 ZNF72P-201ENST00000425869 1908 ntBASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM35Q9UPQ4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 OR6M2P-202ENST00000641780 2063 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL391987.6-201ENST00000305671 199 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 SNORD16-201ENST00000362803 99 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RNU4-50P-201ENST00000364361 141 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-959P-201ENST00000384671 107 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RN7SKP108-201ENST00000411367 328 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL035422.1-201ENST00000414193 397 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RPL21P38-201ENST00000418090 167 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL359265.2-201ENST00000434367 631 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms