Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC097504.1-201ENST00000515103 2415 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 MTCO1P18-201ENST00000455518 1419 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 AC022031.1-201ENST00000585985 2593 ntBASIC3.43□□□□□ -1.86
CLCF1Q9UBD9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL592437.2-201ENST00000421655 2434 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RNU6-796P-201ENST00000391086 107 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 MIR1303-201ENST00000408625 86 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 MTATP6P19-201ENST00000413797 659 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 MTND2P15-201ENST00000418575 892 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL389915.1-201ENST00000422463 466 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 VN1R42P-201ENST00000424651 344 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL138785.1-201ENST00000425821 331 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 OR4F13P-201ENST00000428478 931 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RPL7P15-201ENST00000461190 712 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RPL23AP71-201ENST00000470966 469 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 TRBV8-2-201ENST00000475637 270 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 RNA5SP164-201ENST00000516533 110 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 PAICSP4-201ENST00000517543 1253 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 COX6B1P6-201ENST00000522347 255 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AP003049.1-201ENST00000529418 457 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC090751.1-201ENST00000566966 267 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 HNRNPCP4-201ENST00000571636 900 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AP003117.1-201ENST00000602771 554 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC017076.1-201ENST00000607613 578 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 OR2BH1P-201ENST00000608850 864 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC128687.2-201ENST00000609657 566 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC097460.3-201ENST00000623099 442 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 AC112200.1-201ENST00000625015 234 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 ATE1-AS1-202ENST00000636460 506 ntBASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCF1Q9UBD9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 RNU6-609P-201ENST00000365459 107 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 RNU6-1005P-201ENST00000384519 107 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 RAB9AP3-201ENST00000412737 573 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 HMGB3P31-201ENST00000413333 595 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL158825.1-201ENST00000414735 521 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC092647.1-201ENST00000420654 287 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL031736.2-201ENST00000426573 787 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 ETF1P3-201ENST00000430422 1160 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 KCTD9P3-201ENST00000434597 1169 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 RPL7P28-201ENST00000437739 740 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 RAB9AP1-201ENST00000449393 573 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL133477.1-201ENST00000457472 514 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC091564.1-201ENST00000464563 479 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC078857.1-201ENST00000469870 667 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 UBE2CP3-201ENST00000502715 450 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC139783.2-201ENST00000504847 1145 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC027104.1-201ENST00000563702 681 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 MIR4444-1-201ENST00000581696 74 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 MIR4444-2-201ENST00000584390 74 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC092474.3-201ENST00000603022 568 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL049634.3-201ENST00000604968 457 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC012603.1-201ENST00000606424 528 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 MIR92B-201ENST00000607575 96 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AL512506.1-201ENST00000613918 449 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 AC097372.4-201ENST00000625025 466 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 CFTRP2-201ENST00000634304 199 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 U6.107-201ENST00000637108 79 ntBASIC3.41□□□□□ -1.86
CLCF1Q9UBD9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms