Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL035079.1-201ENST00000405210 287 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL080315.1-201ENST00000406055 466 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 MIR1250-201ENST00000408098 113 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 RPS12P23-201ENST00000419579 400 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 MTND2P18-201ENST00000419962 1030 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC005517.2-201ENST00000424673 553 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 COX6CP13-201ENST00000428703 226 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL035407.1-201ENST00000429211 571 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL356276.2-201ENST00000435919 558 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 NPM1P33-201ENST00000438918 872 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC009963.2-201ENST00000453431 138 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 IGKV2D-36-201ENST00000518643 226 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 BNIP3P1-201ENST00000547295 580 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 MIR4697-201ENST00000582977 78 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC004223.2-201ENST00000590309 544 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC020914.6-201ENST00000594327 272 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 RNA5SP108-201ENST00000605921 117 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AP001521.2-201ENST00000608772 546 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL603755.1-201ENST00000619504 163 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 AC079248.2-201ENST00000623779 326 ntBASIC4.61□□□□□ -1.67
LRFN1Q9P244 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN1Q9P244 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN1Q9P244 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 SNORA77-201ENST00000408716 125 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AF186996.5-201ENST00000418098 904 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC245028.1-201ENST00000423259 256 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AL365203.2-201ENST00000423444 196 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 USP9YP9-201ENST00000429406 715 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AL591503.2-201ENST00000442314 1005 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 RN7SL346P-201ENST00000491561 294 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC104685.1-201ENST00000502445 371 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 TMEM251P1-201ENST00000503717 318 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 BGLT3-201ENST00000564523 994 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC090616.2-202ENST00000584248 222 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AL596327.1-201ENST00000603629 213 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 BNIP3P11-201ENST00000603878 563 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC018714.1-201ENST00000605028 208 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC124312.4-201ENST00000605533 310 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC080013.4-201ENST00000607624 649 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 VIS1.1-201ENST00000610517 203 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC025588.4-201ENST00000615802 908 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 AC018816.2-201ENST00000621460 353 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 AP000676.3-201ENST00000623299 569 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms