Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL593851.1-201ENST00000426171 157 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 RPL23AP52-201ENST00000439311 478 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 EEF1A1P1-201ENST00000447052 739 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC239809.1-201ENST00000450470 217 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 MTCO3P11-201ENST00000455103 774 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC068587.1-201ENST00000483613 781 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 RNA5SP446-201ENST00000515955 82 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 RN7SKP21-201ENST00000516503 220 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 RNU6-1261P-201ENST00000517194 104 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 SOD1P3-201ENST00000518682 454 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 ARL2BPP5-201ENST00000523141 481 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 SMARCE1P4-201ENST00000523647 241 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC087373.1-201ENST00000524920 491 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 PSMB7P1-201ENST00000556349 514 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC004223.2-201ENST00000590309 544 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC008687.2-201ENST00000597865 520 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC010620.1-201ENST00000601088 1102 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 ARF4P1-201ENST00000605447 541 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 COX6CP4-201ENST00000605798 228 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC080013.6-201ENST00000606185 215 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL392048.1-201ENST00000613946 534 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 RNU6-444P-201ENST00000383988 108 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 TPT1P2-201ENST00000413105 503 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC011933.1-201ENST00000413334 321 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 FCF1P2-201ENST00000415284 583 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 MTCO3P1-205ENST00000422088 832 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 RPL21P91-201ENST00000429231 479 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 MTCYBP3-201ENST00000445588 1137 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 RSL24D1P3-201ENST00000449255 495 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 RPL12P26-201ENST00000452430 487 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 RPS15AP1-201ENST00000457423 391 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 RNU7-125P-201ENST00000458760 62 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC116533.1-201ENST00000459748 321 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 RPS3AP43-201ENST00000479743 781 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC091167.1-201ENST00000492017 396 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 KLRA1P-201ENST00000503499 986 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 RNU6-202P-201ENST00000515998 96 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 RNU6-232P-201ENST00000517144 64 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC027309.2-201ENST00000520566 192 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC011477.5-201ENST00000586571 259 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC113403.1-201ENST00000604910 193 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 AL139418.1-201ENST00000613613 177 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AL354976.1-201ENST00000613843 387 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC010608.2-201ENST00000624830 470 ntBASIC5.05□□□□□ -1.6
COL20A1Q9P218 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL20A1Q9P218 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms