Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 U73479.1-201ENST00000618062 168 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC009269.6-201ENST00000621778 588 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AL157770.1-201ENST00000623049 439 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 OR1S1-201ENST00000624470 978 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 MIR3653-201ENST00000625572 110 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.69□□□□□ -1.66
BLOC1S4Q9NUP1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RNA5SP52-201ENST00000362448 134 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-582P-201ENST00000362989 107 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-1226P-201ENST00000384317 107 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-921P-201ENST00000384361 107 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 SNORD116-23-201ENST00000384645 92 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 EIF5P1-201ENST00000400019 1231 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AL079342.2-201ENST00000403367 482 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 MTND4P22-201ENST00000413116 1169 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 EIF4EP1-201ENST00000422311 642 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 GTF2IP2-201ENST00000424290 697 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 DPRXP1-201ENST00000426312 460 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 BTF3P10-201ENST00000433415 495 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC073143.1-201ENST00000436316 395 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC241584.1-201ENST00000438469 1241 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RPL23AP89-201ENST00000439324 255 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 MTATP6P14-201ENST00000455189 673 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC108475.1-201ENST00000507880 950 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 TMEM248P1-201ENST00000510579 951 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RAB9BP1-201ENST00000519581 626 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 IFITM8P-201ENST00000522529 394 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC019227.1-201ENST00000526902 510 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 OR4A45P-201ENST00000529954 901 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC105233.3-201ENST00000531125 744 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 HSPE1P14-201ENST00000605812 302 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AL391834.2-201ENST00000609982 546 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 MIR6748-201ENST00000610433 71 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AC008785.1-201ENST00000624475 456 ntBASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BLOC1S4Q9NUP1 AL133243.3-201ENST00000617415 3004 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 RN7SKP44-201ENST00000363602 316 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-224P-201ENST00000384055 107 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 MIR708-201ENST00000390708 88 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AL355379.1-201ENST00000405542 640 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 RN7SKP182-201ENST00000410772 298 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC016712.1-201ENST00000431088 378 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AL358794.1-201ENST00000445689 381 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 RNA5SP246-201ENST00000458909 119 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC010307.1-201ENST00000467206 836 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AF213884.1-201ENST00000488102 463 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms