Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC068647.1-201ENST00000489539 2265 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 RNU6-152P-201ENST00000384037 107 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC092017.2-201ENST00000427600 362 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 RPL7P2-201ENST00000427639 268 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 BMS1P19-201ENST00000433925 393 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 RPS20P32-201ENST00000456044 356 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 FCF1P3-201ENST00000496394 590 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC026784.1-201ENST00000507986 352 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 PRELID3BP5-201ENST00000508612 460 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC023141.12-201ENST00000512399 199 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC108043.1-201ENST00000512696 574 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 OR4A2P-201ENST00000527276 913 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 PTP4A1P6-201ENST00000531034 478 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 TRAV11-201ENST00000539512 339 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC105429.2-201ENST00000610567 517 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC024941.1-201ENST00000612250 334 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 AC119674.1-207ENST00000641355 633 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 MFSD8-236ENST00000641509 4050 ntBASIC3.59□□□□□ -1.83
TREX1Q9NSU2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TREX1Q9NSU2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TREX1Q9NSU2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.59□□□□□ -1.84
TREX1Q9NSU2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
TREX1Q9NSU2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TREX1Q9NSU2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RNA5SP235-201ENST00000365411 114 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RNU6-31P-201ENST00000384388 108 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RNU2-37P-201ENST00000410695 177 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 MTND4P22-201ENST00000413116 1169 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL356806.1-201ENST00000422524 916 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RPS26P40-201ENST00000435209 294 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL031663.1-201ENST00000437445 219 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 ELOCP3-201ENST00000439303 348 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RPS7P5-201ENST00000441482 581 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC078785.3-201ENST00000476607 425 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 MTND3P6-201ENST00000485242 339 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RPL5P23-201ENST00000496040 868 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 SETP14-201ENST00000497538 873 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 PCBP2P3-201ENST00000509726 843 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 HMGB1P47-201ENST00000511281 589 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC104997.1-201ENST00000519761 717 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC084824.1-201ENST00000550917 1005 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms