Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC009032.1-201ENST00000617574 431 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MIR7702-201ENST00000621931 59 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MIR4278-201ENST00000636094 69 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 GABPAP-201ENST00000419271 1356 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 MIR208A-201ENST00000362287 71 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 RNU1-89P-201ENST00000384592 164 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 HMGB1P10-201ENST00000395823 563 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AL138878.1-201ENST00000405131 347 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC241520.1-201ENST00000422654 1099 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AL358472.1-201ENST00000431295 329 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 PPIAP17-201ENST00000438507 471 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 RPL23AP89-201ENST00000439324 255 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 RPS11P1-201ENST00000451072 473 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 BX276092.4-201ENST00000452056 248 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 ACTR3P3-201ENST00000480448 893 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 SNORA31.13-201ENST00000516624 135 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 PAICSP4-201ENST00000517543 1253 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 IGKV2D-23-201ENST00000518179 286 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC015911.5-201ENST00000587076 451 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC010928.3-201ENST00000587712 541 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 NTAN1P1-201ENST00000603150 646 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC114878.2-201ENST00000604863 1251 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC064801.1-201ENST00000612025 407 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AC119744.1-201ENST00000454746 1715 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 ZNF962P-201ENST00000443465 3140 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
TM9SF3Q9HD45 AL133383.2-201ENST00000622958 2336 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 MTCO1P8-201ENST00000416914 1523 ntBASIC4□□□□□ -1.77
TM9SF3Q9HD45 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TM9SF3Q9HD45 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RAD1P1-201ENST00000231383 813 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 MIR30B-201ENST00000384850 88 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RN7SKP56-201ENST00000410513 331 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 SNORA57.3-201ENST00000411095 141 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RAB9AP3-201ENST00000412737 573 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AL050321.1-201ENST00000432363 400 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RPS26P40-201ENST00000435209 294 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RAB9AP1-201ENST00000449393 573 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 USP9YP5-201ENST00000511770 630 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RN7SKP96-201ENST00000516948 297 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC141257.3-201ENST00000572906 215 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 RPL23AP87-202ENST00000573039 466 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 MIR3944-201ENST00000581277 108 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC018618.2-201ENST00000604770 446 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AL359535.1-201ENST00000612100 1087 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC090246.1-201ENST00000616499 426 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC244100.1-202ENST00000621554 382 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 FP236240.3-201ENST00000623061 327 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC048347.1-201ENST00000624621 427 ntBASIC3.99□□□□□ -1.77
TM9SF3Q9HD45 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms