Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 RNA5SP87-201ENST00000384155 118 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC006960.1-201ENST00000419980 153 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AL139421.1-201ENST00000423010 169 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 RPL21P134-201ENST00000453468 483 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC018638.3-201ENST00000461273 132 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC068587.2-201ENST00000478386 781 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 WBP1LP4-201ENST00000505043 344 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 RNU5A-4P-201ENST00000516588 111 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 BRD9P1-201ENST00000529855 560 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC079171.1-201ENST00000568788 914 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC107982.3-201ENST00000584957 985 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC008759.1-201ENST00000589783 983 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 BPIFA4P-203ENST00000603168 689 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 YWHAQP7-201ENST00000603536 658 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC231759.1-201ENST00000616455 597 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC090246.1-201ENST00000616499 426 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC090510.2-201ENST00000617465 629 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 OR6C71P-202ENST00000641886 1107 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.38□□□□□ -1.71
BRF2Q9HAW0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 OR10J6P-201ENST00000289731 930 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 RNA5SP151-201ENST00000365632 117 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 RNU6-83P-201ENST00000384568 112 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 MIR124-3-201ENST00000384866 87 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 RPL21P108-201ENST00000413857 481 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC008072.1-201ENST00000434254 824 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC005008.1-201ENST00000456151 612 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC092324.1-201ENST00000468671 324 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 IGLV2-34-201ENST00000490007 283 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC021146.3-201ENST00000511911 260 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC008127.2-201ENST00000549925 1075 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 OR4K7P-201ENST00000580232 945 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC073091.2-201ENST00000603205 907 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 ELOCP35-201ENST00000604289 336 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AL133338.2-201ENST00000604292 736 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC080013.3-201ENST00000606839 578 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC211433.2-201ENST00000608433 387 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC131235.4-201ENST00000609288 620 ntBASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
BRF2Q9HAW0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms