Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 MIR93-201ENST00000385024 80 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 DSTNP4-201ENST00000399472 474 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 MTND4P3-201ENST00000417829 541 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RSL24D1P6-201ENST00000426934 401 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 PSMA2P3-201ENST00000429685 675 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AL513175.1-201ENST00000431492 780 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC010881.1-201ENST00000433830 235 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AL353748.1-201ENST00000440753 474 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 BX276092.4-201ENST00000452056 248 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RPS15AP1-201ENST00000457423 391 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RPL6P9-201ENST00000466502 859 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RPL23AP2-201ENST00000471227 466 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC041039.1-201ENST00000485656 536 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RN7SL691P-201ENST00000494487 301 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 ATP1B1P1-201ENST00000509767 915 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 KRT19P6-201ENST00000510983 209 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC093752.1-206ENST00000511823 336 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 SOD1P3-201ENST00000518682 454 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC138701.1-201ENST00000524329 714 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 MTND2P26-201ENST00000528255 1029 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC044913.1-201ENST00000557200 430 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 EIF5A2P1-201ENST00000564027 460 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 AL445567.2-201ENST00000618935 498 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 OR52H1-202ENST00000641796 1061 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 MTCO1P14-201ENST00000441695 1559 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 DCAF13P1-201ENST00000495256 1330 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC107081.3-201ENST00000612715 2034 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RHOT1P2-201ENST00000366423 333 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 MIR513A2-201ENST00000385249 127 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 SNORD66.1-201ENST00000391230 76 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RNU6-575P-201ENST00000411326 105 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RPS7P9-201ENST00000414704 586 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC092832.1-201ENST00000422934 400 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 OR4F13P-201ENST00000428478 931 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RPL36P19-201ENST00000430744 301 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AL132765.1-201ENST00000434165 553 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 RPL7P59-201ENST00000447700 943 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC009963.2-201ENST00000453431 138 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 snoU109.3-201ENST00000459477 145 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC096571.1-202ENST00000506634 735 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 PRELID3BP5-201ENST00000508612 460 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC091163.3-201ENST00000518269 1144 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC023632.1-201ENST00000518463 375 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AC090281.1-201ENST00000523019 276 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 OR5BC1P-201ENST00000529327 739 ntBASIC3.95□□□□□ -1.78
UBQLN3Q9H347 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.95□□□□□ -1.78
UBQLN3Q9H347 PARP1P2-201ENST00000556806 195 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms